Coregonus clupeaformis (lake whitefish): 121573957
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Entry
121573957 CDS
T08357
Name
(RefSeq) cytotoxic and regulatory T-cell molecule isoform X1
KO
K16361
cytotoxic and regulatory T-cell molecule
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121573957
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cclu04515
]
121573957
04090 CD molecules [BR:
cclu04090
]
121573957
Cell adhesion molecules [BR:
cclu04515
]
Immunoglobulin superfamily
Nectin family
121573957
CD molecules [BR:
cclu04090
]
Proteins
121573957
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
V-set
ig
Ig_2
C2-set_2
Lep_receptor_Ig
DUF6476
LapA_dom
Motif
Other DBs
NCBI-GeneID:
121573957
NCBI-ProteinID:
XP_041742307
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All DBs
Position
9:39054832..39068366
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AA seq
434 aa
AA seq
DB search
MALNLQLCFLVLFVRGSVAVQHMTVMEGETLTMKCRIRNAQKSHVEWKNPDGHVMFFNDQ
KALKDKRYKIINLSESDFSVSVSDVTFKDGGLYTCLQYSHKVPVVKWVNVTVLGKPKLEI
TEHNGKTAIKCSAVGNGHPPKISWLLESGLEMYAQPQYLLDKNTYSSLDILHVQSHKRRV
TLKCIVRHPALHNSSLMNFVKIGQNPTEESHSTARASHWPSTEGPTEVTTTTTTTVSRWP
STQVSTETPTATALDWPNTEGSPASTPDLQLSTHSWSSVSQTTENTPHNGTGSNSTNARG
SLFNDTEKQRGTGGSAPLLIFLVTCLILGLLVVVSLFVIKLRRAHILWKKENEDSDQSVE
SNRSKSSNEDKQSRGRRGNGLFNIRFTKYVVEEPTATETTTTTTNTKTEEDPEIQVIPQI
NGATQSPPIKETEL
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggcactaaatctacagctttgcttcctagtcttgtttgtaaggggatccgttgcagtg
caacatatgaccgtgatggagggtgagacactaaccatgaagtgtcgcattagaaatgcc
caaaagagccacgtggaatggaagaatcctgatgggcatgtgatgttttttaatgaccag
aaggccctgaaggacaagcgctacaagataataaacttgtctgagtctgatttttcagtc
agtgtgtctgatgtcaccttcaaagatggaggcctctacacatgtttacagtacagtcac
aaagtgcctgtagtgaagtgggttaatgtgacagttttgggtaagccaaaattggagata
acagaacacaatggaaagactgccatcaaatgttctgcagtgggaaatggccatcctccc
aaaatctcatggctgttggagagtgggttagaaatgtatgctcagccccagtatctgttg
gacaaaaacacatattcctccctggatatcttgcatgttcagtcccacaagaggagagtc
acattgaaatgcatcgttcgccatccagccttacacaattcatccctgatgaatttcgtc
aaaattggacagaatcccactgaggaatcacactccactgcgagagcctctcattggccc
agtacagaaggtccaacagaggtaacaacaacaacaacaacaacagtctcccgttggcct
agtacacaggtgtcaacagaaacaccaacagctacagccttagattggcccaatacagag
ggatcaccagcatcaacccctgacttacaactcagcactcacagttggtcgtcagtgtcc
cagacaacagagaacacacctcataatggcacaggaagcaactccaccaatgctagagga
agcttattcaatgacacggagaagcagagaggaactggaggaagtgcgccattgctcatc
ttccttgtgacatgcctcatcctcggtctgcttgtggtcgtttcgctcttcgtgatcaag
ctgaggagggctcacattctctggaagaaagaaaatgaagactcggatcaatctgtggag
agcaacagatcaaaatcaagcaatgaagacaaacaatctagaggaagaaggggcaacgga
ctctttaacatcagattcacaaagtatgtcgttgaggaacccacggcaacagagacgacg
acaacaacaacaaacaccaaaacagaagaggatcctgaaattcaagtcatcccacagata
aatggagcaacccaaagccctccgatcaaggagacggaactgtaa
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