Coregonus clupeaformis (lake whitefish): 121574004
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Entry
121574004 CDS
T08357
Name
(RefSeq) lymphoid enhancer-binding factor 1 isoform X1
KO
K02620
transcription factor 7
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04310
Wnt signaling pathway
cclu04520
Adherens junction
cclu04916
Melanogenesis
cclu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121574004
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
121574004
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
121574004
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121574004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121574004
Transcription factors [BR:
cclu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
121574004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
121574004
NCBI-ProteinID:
XP_041742431
LinkDB
All DBs
Position
Unknown
AA seq
511 aa
AA seq
DB search
MPQLSSGGGDDLGANDEMISFKDEGDQDEKIQENAFTERDLADLKSSLVNESETNQSPNA
AAVRRGQQNEHRGYQEKHREHLDCVSKHQDGGMHKTLYPGYPFLMLPDPYIPSGSVSPSS
NKVSVVQQSHGMHPLTSLLPYSNDHFNPSPPHLPTDMSQKGIHRPQSQDISGFYSLPQSG
VGQMPPSMGWQSQPVYPLSSCGFRQPYSSSLPNSSSYPRFSHSLMLGPGMHPTGIPHPAI
VPPSGKQDHHDHYDRNMYAKPHQEPKREKEPKKPVIKKPLNAFMLYMKEMRAKVIAECTL
KESAAINQILGRRWHALTREEQAKYYELARKERQLHMQLYPSWSARDNYEAGLREGAGEK
NKADWGKKKRRKREKQQDSTTDPGSPKKCRARFGLNQQTDWCGPCRRKKKCIRYLQGGWC
ASPTSSDGSAIDSPPSPVDGVPPQHPSLPSSPSPASPSDIPLHPQPSKQHTPLILSKPKT
TELSLKALIESSQQHDNLNHHHHDCTLPKSH
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagctcagtagtggcggaggagatgatctcggagcgaacgatgaaatgatatcc
tttaaggatgaaggcgatcaagatgagaaaattcaagaaaacgctttcacagaaagggac
ttagctgacctcaagtcgtctctggtgaatgaatcggagacaaatcaaagtccgaacgca
gcggcggtcagacggggacagcaaaacgaacacagaggttatcaagagaaacaccgggag
catctcgactgcgtttccaaacatcaagatggaggaatgcataaaacactgtatccaggg
tacccgtttctcatgctgcccgacccatacatccccagcggatcagtgtcaccatcttcc
aacaaagtttcggtggtccagcagtctcacgggatgcaccccctgacgtccctgttgccg
tacagcaacgaccacttcaaccccagcccccctcacctgcccacagacatgagccagaaa
ggcattcacaggccccagtcccaggacatctcaggcttctactccctacctcagagcggt
gtgggacagatgcccccctccatgggctggcaaagtcagcctgtctatcccctgtcctca
tgtggattcagacagccctactcctccagtctccccaacagctcttcctaccccaggttc
tctcactctctgatgctaggaccaggcatgcaccccacaggcatcccccacccagccatc
gtgccaccttcaggcaaacaggaccatcatgaccattacgacaggaacatgtacgctaag
ccacaccaggagcccaagcgggagaaggagcctaagaagccagtgatcaagaagcctctg
aatgctttcatgctgtacatgaaggagatgagggccaaggtgattgctgagtgcaccctg
aaggagagcgctgccatcaaccagatactaggcagaaggtggcacgccctgacccgggag
gagcaggccaaatactatgagctggccagaaaggaacggcagctacatatgcagctctac
cccagctggtccgccagagacaactacgaggcgggccttagagagggcgcgggggaaaag
aataaagctgattggggcaagaagaagagaagaaaaagagagaagcagcaggactccacc
acagaccctggctctcctaagaaatgcagagctcgcttcggcctcaaccaacaaacggac
tggtgtggtccctgcaggaggaaaaagaagtgcattcgataccttcaaggaggatggtgc
gccagccccacttcttccgatggaagcgctatagactcgcccccctcccccgtcgacggc
gtcccccctcagcacccctccctgcccagctcgccctcgcccgcttccccctcagacatc
cccctgcacccccagcccagcaaacaacacacaccccttatcctctcaaaacccaagacc
acagaactatctctcaaagctttaatagaatcatcccaacagcacgacaatctcaatcat
catcatcatgactgtaccctgcccaagtctcactag
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