Coregonus clupeaformis (lake whitefish): 121574012
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Entry
121574012 CDS
T08357
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 6-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00061
Fatty acid biosynthesis
cclu00071
Fatty acid degradation
cclu01100
Metabolic pathways
cclu01212
Fatty acid metabolism
cclu03320
PPAR signaling pathway
cclu04146
Peroxisome
cclu04216
Ferroptosis
cclu04920
Adipocytokine signaling pathway
Module
cclu_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
121574012
00071 Fatty acid degradation
121574012
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
121574012
09143 Cell growth and death
04216 Ferroptosis
121574012
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
121574012
03320 PPAR signaling pathway
121574012
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cclu01004
]
121574012
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121574012
Enzymes [BR:
cclu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
121574012
Lipid biosynthesis proteins [BR:
cclu01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
121574012
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of breast milk
121574012
Exosomal proteins of breast cancer cells
121574012
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
121574012
NCBI-ProteinID:
XP_041742453
LinkDB
All DBs
Position
9:48992830..49053762
Genome browser
AA seq
723 aa
AA seq
DB search
MLSFVLVSGSVWIILELSSTLMERMQAQELMSSLQLPELDELTQFFRSLPTSTLVGIGTL
TAVLAYWLATRPRAISPPCNLQHQSEEVLHEDGGRRSMLGESPNKLLTHYHEDAKTMYEV
FQRGLHIAGDGPCLGSRLPNQPYKWLSYKEVTTRAEHLGSGLLSQGCTPSPDQFIGVFAQ
NRPEWIISELACYTYSMVVVPLYDTLGPDAIRYIINTADIITVICDKPEKAQVLLGNVER
QETPGLKRIILMDPFDHALLEQGEGCGVIVQSMQDIEALGREKHRNPMPPTPEDLSIVCF
TSGTTGNPKGVMLTHGNVVADFSGFLKVTDKVIFPNQDDVLISFLPLAHMFERLIESVVY
CHGGRIGFFQGDIRLLSDDMKALRPTILPVVPRLLNRMYDKIFSQANTPLKRWLLNFAAK
RKGAEVSNGIIRMDSLWDKIFFSKIQASLGGRLRMIITGAAPASPAVLGFLRAALGCQVY
EAYGQTECTAGCTFTTPGDWTSGHVGAPLPCNLIKLVDVAEKNYFAAKGEGEVCVKGPNV
FKGYLKDPERTAETLDKDGWLHTGDIGKWLPNGTLKIIDRKKHIFKLAQGEYISPEKIEN
IYIRCEPVTQLYVHGDSLQSCLVAIVVPDPETMPAWALKKGMEGSYRDLCKNTVLKKAIM
EDLQRLGKASGLHSFEQVKNIYIHNEQFSIKNGLLTPTLKAKRPELKEFFKEKIEDLYEN
ISM
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgctttccttcgttctggtctctgggtctgtctggataatattagagctgagttccacc
ctgatggagaggatgcaggcccaggagctaatgagcagtctacagctgcctgagctagac
gagttaacccagttcttccgctccctgcccacctccacgctggtgggaatcggtaccctg
actgccgtgctggcctactggctggccacacggccacgcgccatctctcctccctgcaac
ctccagcaccagtctgaggaagtgctgcatgaagatgggggtcgcaggtcaatgctgggg
gaaagccccaataagctgctgacacactaccatgaggatgccaagaccatgtacgaggtg
ttccagagaggcctccacatagccggtgatggaccttgcttaggctcccggctacccaac
cagccttacaagtggctgtcctataaagaggtcacaacccgggcggagcacttggggtcg
gggctgctgagccagggctgcacgccgagcccagatcagttcatcggagtgtttgcacag
aacaggccagagtggatcatttcggagctggcctgctacacctactctatggtggtggtg
cctctgtatgacacactagggcctgatgccatacggtatatcattaacactgccgacatc
atcacagtgatctgcgacaagcctgagaaggcccaggtgctgctgggtaacgtggagagg
caggaaacccccgggctgaagaggatcatcctcatggacccttttgaccatgccctgctg
gagcaaggggagggctgtggggtcatcgtccagtccatgcaagacattgaggcactgggc
agagagaagcacagaaatcccatgccacctacgccagaagacctgtccatcgtgtgcttc
accagtggtaccacaggaaacccaaagggagtcatgcttacacatgggaatgttgtggct
gatttctcaggcttcctcaaagtgacagataaagtcatcttcccaaaccaagacgatgtt
ctcatctccttcctgcctctggctcacatgtttgagagactcattgagtctgtggtgtat
tgtcatggtggccggatcggctttttccaaggcgacatccgcctgctgtctgatgacatg
aaggccttacggcccacaattctccctgtggtaccacgattgctcaaccgcatgtacgac
aagatcttcagccaggccaacactccattgaagcgctggctgctgaactttgcagccaag
agaaaaggggcagaggtcagcaatgggatcatccgcatggacagcctgtgggataagata
ttcttcagtaagatacaggccagcctgggtgggaggttacgtatgattataactggagct
gctccggcctcccccgctgtactgggatttctcagggcagcactgggttgtcaggtgtat
gaggcgtatggccagacagagtgtactgctggctgtacttttaccactcctggagactgg
acctcaggtcatgtgggggcaccactgccatgtaacctcatcaagctggtggatgtggct
gaaaagaactactttgctgccaaaggagaaggagaggtgtgtgtgaaaggacccaatgtt
tttaagggctaccttaaagacccagagaggacggctgaaaccctggataaagacggttgg
ctccacacaggagacatagggaaatggttacctaacggtacactaaagatcattgacagg
aagaagcacatctttaagctggcccagggagagtacatctcccctgagaagatagagaac
atctatatacgctgtgagcccgtgacccagctctatgtccatggtgacagcctacagtcc
tgtctggttgccatagttgttcctgacccagagacgatgcctgcttgggccctgaagaaa
ggcatggaggggagctatcgggacctctgtaaaaataccgtcctgaagaaagccatcatg
gaagacttgcagcgactgggcaaggccagcggcctccactcgtttgagcaggtgaaaaac
atctacatccataatgagcagttctccataaagaatggcctgttgactcccacactaaaa
gcgaagagacctgagctgaaggagtttttcaaggagaagatcgaagacctgtacgaaaac
atctccatgtga
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