Coregonus clupeaformis (lake whitefish): 121574014
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Entry
121574014 CDS
T08357
Name
(RefSeq) PDZ and LIM domain protein 4-like
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121574014
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121574014
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
121574014
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GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
BNR_2
SNAPC3
Lar_restr_allev
Motif
Other DBs
NCBI-GeneID:
121574014
NCBI-ProteinID:
XP_041742456
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All DBs
Position
9:48837716..48908725
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AA seq
369 aa
AA seq
DB search
MPHTVTLNGPSPWGFRLVGGRDFSTPLTISRVTPGSKAAQGDLCPGDTILAINGDSTETM
THMEAQNRIKACMGELTLAISRSGDKVWSPTVIEDGKTSPYMATLESESPQNFRPISTGP
ITSGCSSSYSRGNNSSGYSRKPSYTPELPHLNNGTSKQSNNVQYNNPAGLYAHNNGSNGD
RDRVLPNQMAGLSLSSPHSPEPPMHSPVGRNGNGHSFEVTTESDVYKMLQDTEEPVSAPK
QSGSFKYLQGILEAEDGGVSPTDMSGVRGLRTPDRSPVPKLGSPIPGLQKLPQCTRCGNG
IVGTIVKARDKLYHTECFMCDDCGMNLKQRGYFFIEENLYCETHAMARVQPPEGYDVVAV
YPNSKVELV
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgccccacaccgtgacattgaatggaccctcaccttggggttttcgactggtcggtgga
agggactttagtacaccgttaactatttcgagggtaacaccgggcagtaaggcagcacag
ggggacctttgtcctggagacaccatcctggccatcaatggagacagcacagagaccatg
acacacatggaggcccagaacaggatcaaggcctgcatgggggagctcacactggccatc
agcaggtcaggagacaaagtctggtctccaactgttattgaagatggcaagacaagtcca
tacatggccacgttggagtctgagtcaccacagaatttccgacccattagcactggacca
atcaccagtggttgcagcagcagctacagcagggggaacaacagcagcggttacagccga
aaaccctcctacactcccgagctgccgcacctcaacaacggtacctccaagcagtccaac
aatgtgcagtacaacaacccagccggcctgtacgcacataacaacggcagcaacggagac
agagacagggtcttgccaaaccaaatggccggcctgagcctgagttcccctcacagccct
gagcctccgatgcattctcctgtgggccgtaatggaaacggtcatagttttgaagtcacc
accgagtcagacgtgtacaagatgctgcaagacacggaggagccagtgtccgcacccaaa
cagtccggctccttcaaatacctacagggcatattggaggcagaggatggaggtgtgtcc
cccactgacatgtctggagtgagaggcctgagaaccccggaccgatccccagtccctaaa
ctgggcagccccatccccggcctacagaaactcccccagtgcacgcgctgtggcaacggc
atagtgggcaccatcgtgaaggccagggacaagctgtaccacacagagtgcttcatgtgt
gacgactgcggcatgaacctcaagcagaggggctacttcttcatcgaggagaacctgtac
tgtgagactcacgccatggcccgcgtacagcctcctgagggatatgacgtggtcgccgtc
taccccaactccaaggttgaactggtctga
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