Coregonus clupeaformis (lake whitefish): 121574036
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Entry
121574036 CDS
T08357
Name
(RefSeq) glucocorticoid receptor
KO
K05771
glucocorticoid receptor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121574036
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121574036
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cclu03310
]
121574036
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
121574036
Nuclear receptors [BR:
cclu03310
]
3. Estrogen like
3C. 3-Ketosteroid receptor
121574036
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Motif
Pfam:
GCR
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
121574036
NCBI-ProteinID:
XP_041742501
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Position
9:46624522..46718697
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AA seq
761 aa
AA seq
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MDRGGLKHSNNQDKRLERGEEGSFSGKAGGSKSTTLTSVMHLPGSTPQPPARDSSNGLNV
TKTQGERSTAGTASMGLTIEEAEVKVMGKALRMQHTQKQQQNQQQQQLFENFALLEESIS
DLNRSNTPGSSVLECPNDLFPLKTEDFSPMDKDRLNMGTVSFGQSLKDLDSNDNSLDILQ
DLDLPGSLSDLNEFYLADEAAFLSSLSVDDALLGDGNMETKPIVSSSGGNCKNVNGADQQ
QQLLGPGISMPVIKTEKDADTSFIHLYTPGVIKQENEHQSYCQISSLDIPGTHSSVDSMS
GLSYHYSANTSTAVSIQQDQKPVFGLYPPLPSVSDGWNRGNGFGDGSGMSTPSSSSFLVS
FSSPTARPEASGSTSSAPAKHSGPTHKICLVCSDTASGCHYGVLTCGSCKVFFKRAVEGW
RARQNTDGQHNYLCAGRNDCIIDRIRRKNCPACRFRKCLQAGMNLEARKNKKLIRLKGQQ
GTTEPNAPSPDERVCALIPKSMPQLVPTMLSLLKAIEPEAIYSGYDSTIPDTSTRLMTTL
NRLGGQQVVSAVKWAKSLPGFLNLHLDDQMTLLQCSWLFLMSFGLGWRSYQQCNGGMLCF
APDLVINDERMKLPYMTDQCEQMLKISTEFVRLQVSYDEYLCMKVLLLLSTVPKDGLKSQ
AVFDEIRMTYIKELGKAIVKREENSSQNWQRFYQLTKLLDSMQEMVGGLLQICFYTFVNK
SLSVEFPEMLAEIISNQIPKFKDGSVKPLLFHHALNHDTMP
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atggatcgaggtggactgaaacacagcaataaccaggacaagcgcttagagagaggtgaa
gagggaagcttctcaggtaaagcaggcggttccaagtccaccacattaacctccgtgatg
catctgcctggctccacaccccagcctccagccagagactcctccaacggactgaatgtc
actaagactcagggtgagcgctccacagcagggacagcctccatgggactcactatagag
gaggctgaagtgaaggtaatgggcaaggccctgagaatgcagcacacacagaaacagcag
cagaatcaacaacagcagcagctgtttgagaactttgctctgttggaagagagtatttca
gatttgaatcgatccaacaccccggggagctcagtacttgaatgtcctaatgaccttttc
ccgctgaaaacagaggacttttcacccatggataaggacaggcttaacatggggacagtc
agctttggacagtcactgaaggacttggatagcaacgacaattcgctggacattctgcag
gatttggacttgcctggctctctgtctgacctgaatgagttttacctggctgacgaggcc
gctttcctttcctccctgtcagtggatgatgccctgctcggtgacggcaacatggaaacc
aagcccatagtcagtagcagtgggggaaactgtaaaaatgtgaatggcgcggaccagcag
cagcagctactggggccaggcatctccatgcctgtcatcaagacagagaaggacgctgac
acctccttcatccatctttacaccccaggggtaatcaagcaggagaacgagcaccagagc
tactgtcagatatccagcctggacatacctggtacccacagctcggtggactccatgagt
ggactgagttaccactacagcgcaaacacatcgacggcagtgagtatacaacaggatcag
aagcctgtctttggcctttatccgccactgccctcagtcagtgatggctggaacagaggc
aatggatttggggatggatcagggatgtcaactccatccagctcatcctttcttgtcagc
ttcagcagtccaacggccagacccgaggccagcggctccacgtcgtcagcccctgccaag
cacagcggtccaacccataagatctgcctggtgtgttcggacacggcctctggctgccac
tatggagtcctcacctgcggaagctgcaaggtcttcttcaagagggccgttgaaggatgg
agagcacgacaaaacacagatggacaacacaactatctgtgtgccgggaggaatgactgc
atcatagacaggatccgcaggaagaactgcccggcgtgccgcttccgcaagtgtctccaa
gcagggatgaacctggaagcaaggaaaaacaagaagctgatccgattaaaaggtcagcag
ggcacgacggagccgaacgctccatcacctgacgaaagggtctgcgccctgatccccaag
tccatgccccagctggtgcccaccatgctgtccctgctcaaagccatcgagccagaggcg
atttactctggctacgacagcaccatccccgacacctccacccgccttatgaccaccctc
aacaggttgggtggacaacaggtcgtctcagctgtcaagtgggccaagtccctaccaggg
ttcctgaaccttcacctggatgaccagatgaccctgctgcagtgctcctggctgttcctc
atgtcgttcggccttggctggcgctcctaccagcagtgtaacgggggcatgctgtgcttc
gcccctgacctggttattaatgatgagaggatgaagctgccctacatgaccgaccagtgt
gagcagatgctgaaaatctctactgagtttgtgaggttgcaggtgtcctacgacgagtac
ctgtgtatgaaagtcctgctgctgctcagcacagtaccaaaggatggattgaagagccag
gctgtgtttgatgagatccgcatgacctacatcaaggagctggggaaggccatcgtcaag
cgggaagagaactccagccagaactggcagaggttctatcaactcactaagctactggac
tccatgcaggaaatggtggggggcctcctgcagatctgcttctacacttttgtgaataaa
tccctgagtgtggagttccctgagatgctggccgagatcatcagcaaccagataccaaaa
ttcaaagacgggagtgtcaagccgcttctgtttcatcatgccttaaaccatgacacaatg
ccttaa
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