Coregonus clupeaformis (lake whitefish): 121574042
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Entry
121574042 CDS
T08357
Name
(RefSeq) homeobox protein MSX-2-like
KO
K09341
homeobox protein MSX
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121574042
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
121574042
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
121574042
NCBI-ProteinID:
XP_041742517
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All DBs
Position
9:complement(49723158..49727246)
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AA seq
261 aa
AA seq
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MSTHVSWTDSSSSEEDSRPERERTMDDRKTQVTKHHHPFSVEAIMSGRNTHSEFTSKSDN
VSVVTFSKTQNSPFLCRETYSPPEGIRKHFVPPSPVKSESSEPDDCAPWVTSPRFSAQTR
QVSPSCPLRKHKTNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLTLTETQVKI
WFQNRRAKAKRLQEAELEKLKMAAKPVLHPGFTLPMPLGAQLHTAVSLYGQSYPYHRPML
PLSPMGLYATPLGYSMYHLSR
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgtctacccatgtgagttggacggatagcagttcatcggaagaggacagccgacccgag
cgggagaggacgatggatgaccgcaaaactcaagtgactaaacaccatcatcccttcagt
gtggaggctataatgtcgggtagaaacactcatagtgagtttacaagcaaatccgacaat
gtctctgtggttacattttcaaagactcagaactctccgttcctgtgcagagagacatat
agccctcccgagggaatccgaaagcactttgtcccaccatcgcccgtaaagtcggagtcc
tccgagccggatgactgtgctccctgggttacgagcccaagattctcagcgcaaactcgg
caggtgagtcctagctgtccactgagaaagcacaagaccaatagaaagcctcgtactcct
ttcaccacctcccagctgctggctctggagcgtaagtttcgtcagaagcagtacctgtcc
atcgcagagcgggccgagttctccagctctctgaccctgactgagacccaggtcaagatc
tggttccagaaccgccgggccaaggccaagagactacaggaggccgagctggagaagctc
aaaatggctgccaaacccgtgctgcacccgggctttacgttacccatgcccctgggtgcc
cagctccacacagctgtctccctgtacggacagtcttacccctaccaccgaccaatgctg
cccctctcacctatgggactgtatgctacaccgctgggctacagcatgtatcacctatca
cgatga
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