Coregonus clupeaformis (lake whitefish): 121574067
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Entry
121574067 CDS
T08357
Name
(RefSeq) early growth response protein 1
KO
K09203
early growth response protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04371
Apelin signaling pathway
cclu04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
121574067
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
121574067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121574067
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2His2 SP/KLF family and related proteins
121574067
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GFIT
Motif
Pfam:
DUF3446
zf-H2C2_2
DUF3432
zf-C2H2
zf-C2H2_4
C2CH-3rd_BIRD-IDD
zf-C2HC_2
zf-C2H2_15
zf-BED
zf-CHY
zf-H2C2_5
Motif
Other DBs
NCBI-GeneID:
121574067
NCBI-ProteinID:
XP_041742572
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Position
9:51329957..51333407
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AA seq
489 aa
AA seq
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MAATKTEMLLSALQISDPLGFPYSPMDSYPKLEELMLLHSSGTPFLAASTAEGVGFGTGE
PGDSYEHLNEDTLPDISIGCDKSLIDQTYSTPRLPSISYTGRFTLEPATSCSNSMWAEPL
YSLVSGLIGMSQPPTSVASCSSAVPVSSSSHTMSCPVQIGDSNPIYSAALTYSSVSPDLF
PDSNQSFPSPSNSSVQYPPPTYPSSKTCSSNMALPMIPDYLFPQQQGEISLLPPDQKPFQ
SQSIQQQLSLTPLSTIKAFATQTGFQDHKGSYQSQLVKPNRMRKYPNRQCKTPPHKRPYA
CPVETCDGRFSRSDELTRHIRIHTGQKPFQCRICMRKFSRSDHLTTHIRTHTGEKPFACD
ICGRKFARSDECKRHTKIHLRQAKDRKVEKAGPTPMVIPSPVSGFSSPSTSYLSPSSSYP
SPVPSCYSSPMHSSYGSPSVNTMYSSASSIFQTQVSTSYGSPTNVYISQVGTPQSELQST
LSLKNIDIC
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaccaagacagagatgctcctctcagcccttcagatctcagacccactaggc
ttcccctactctcccatggacagctaccccaagttggaggagctgatgttgctccactcc
tcagggaccccgttcctggctgcctccacagcagaaggtgtaggctttgggaccggggag
ccaggagactcatacgaacatctgaatgaagatacattacctgacatctctatcggctgt
gacaagtctcttatcgaccagacctactcaacccctcgactgccctctatctcctataca
gggaggttcaccctggagcctgcaaccagctgcagcaacagcatgtgggcagagccatta
tacagcctggtcagtgggctgataggcatgtcccaaccgcccacctcagttgcctcatgc
tcctctgctgtgccggtcagctcctcctcccacaccatgagctgccccgtccaaatcggt
gattccaaccccatctactcggctgcactcacctactccagtgttagccctgacctcttc
cctgactctaaccagtccttccccagcccctcaaacagctcagtccagtacccaccgccc
acctaccccagcagcaagacctgctcctccaacatggctctgcccatgatcccagactac
ctgttcccccagcagcagggtgagatcagcctgcttccccctgaccaaaagcctttccag
tctcagagcatccagcagcagctctccctcacacccctgtccaccatcaaagcttttgcc
acacagactggctttcaagatcataaaggttcctaccagtctcagctggtcaaacccaac
cgcatgcgcaagtaccccaaccgccagtgcaagacccctccccacaagcgcccctacgcc
tgccccgtggagacgtgcgacggccgtttctcccgttcagacgagctgacacgccacatc
cgtatccacacgggccagaagcccttccagtgccgcatctgcatgcgcaaattcagccga
agcgaccacctgaccacacacatccgcacgcacaccggcgagaagcccttcgcctgcgac
atctgcggccgcaagtttgcccgcagcgatgagtgcaaaaggcacaccaagatccacctg
aggcaggcgaaggacagaaaggtggagaaggcagggcccacccccatggtcatcccctcc
ccagtctcagggttctcctccccctccacatcatacctctctcccagctcctcttacccc
tccccagtgccctcctgctactcctccccaatgcacagctcttatggctccccatcagtc
aacaccatgtactcctcagcctccagtatatttcagacacaggtttccacctcatacggc
tcccccacaaacgtttacatctcccaagtgggcactcctcagtcagaactgcagtccacc
ctctctctaaaaaacattgacatctgctaa
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