Coregonus clupeaformis (lake whitefish): 121574079
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Entry
121574079 CDS
T08357
Name
(RefSeq) glutamate receptor 1 isoform X1
KO
K05197
glutamate receptor 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121574079
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121574079
Ion channels [BR:
cclu04040
]
Ligand-gated channels
Glutamate (ionotropic)
121574079
BRITE hierarchy
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
DUF740
Motif
Other DBs
NCBI-GeneID:
121574079
NCBI-ProteinID:
XP_041742594
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All DBs
Position
9:complement(52360225..52478746)
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AA seq
935 aa
AA seq
DB search
MQRSLTLVFVSFCVGFCSGSSFPSNINIGGLFPTGSHEYEVFRFALSHHQDIPKLVPQVD
MVDTASSFAMTYAFCSQFSKGVYAIIGLYDRKTMNMLMSFCGALHVCFVTPSFPIETNNQ
FVIQLRPELQEPLIALIQHYKWTKFVYMYSSHSGLTVLQKILDTAAEKTWQVTSVNLDSG
MDQAAFLKVVQDLEKKKEYNIILDCELERLNMILNLIAAQKKNLKNYHYILANLGFLDMN
FTEFQKSGANITGFQIMNYSDENVSKAIEEWVDFDSKDLKQPKRRLKYTGALTYDGVSVM
ATAFQNLRKQRIDISRRGNAGECLANPPAPWGQGIDIQRALQQVRIEGLTGHVQFNEKGH
RTNFTVNVMELSPSGPLKVGYWNEYENYVNTAVYTPVVEEFFGLQNRTYIVTTILESPYV
MLKKNHEQLVGNDKYEGYCVELAAEIAKHVGYTYKLEVVSDGKYGARDAESKMWNGMVGE
LVYGKADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPTKSKPGVFSFLDPLAYEIW
MCIVFAYIGVSVVLFLVSRFSPYEWQGDDSDGEEGQEQQQRPQHNQPSSSSPRREPGQSQ
SQQGQNQGQGQGQGQGQGEGHTNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWW
FFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDGGSTKEFFRRSKIAV
FEKMWSYMKSADPSVFVKTTDEGVVRVRKSKGRYAYLLESTMNEYIEQRKPCDTMKVGGN
LDSKGYGIATPKGSALRNPVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSA
LSLSNVAGVFYILIGGLGLAMLVALVEFCYKSRIESRRMKQIIDAAMLSSTLSRMTRTGS
GGENGRVVAHDFPKAAQTLPCMSQAAGMGLSTTGM
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgaagccttaccttggtctttgtcagtttttgtgttgggttttgctctggttca
agtttcccaagtaatatcaatatagggggattgttcccaacgggctcccatgaatatgag
gtttttcggtttgcgctatctcatcaccaggatatccccaaactggtaccacaagtggac
atggtcgacaccgcaagcagctttgctatgacatatgcattttgttcacagttttccaaa
ggagtctacgccatcatcggactgtatgacaggaagaccatgaacatgctcatgtcgttc
tgtggggctctccacgtctgctttgtgacacccagtttccccatagaaaccaacaaccag
tttgtaatccagctgagaccggagctccaggagcccctgattgccctgatccagcactac
aaatggaccaagttcgtttacatgtacagctcacattcaggcctgacagtgctgcagaag
attctggacacggcagcagaaaagacatggcaggtgacatcagtgaacctggacagcggt
atggatcaggcggccttcctgaaggtggttcaggacctagagaagaagaaggaatacaac
atcatcctggactgtgagctggagagactcaacatgatcctcaacctgatcgctgctcag
aagaaaaacctcaaaaattaccactacatattggcaaacctgggctttttggacatgaac
ttcactgagttccagaagagtggtgccaatatcaccgggttccaaataatgaactactca
gacgaaaacgtcagcaaggccatagaggagtgggtggactttgacagcaaagacctcaaa
caacccaagagaagactgaagtacacaggagccctcacatacgacggagtgagcgtcatg
gccactgcctttcagaaccttcggaagcagcgtattgacatttcccggcgaggtaatgct
ggcgagtgtctggccaacccaccagctccctggggccagggtatcgacatccagagagcc
cttcagcaggttcggattgagggattgactggacatgtccagtttaacgagaaaggccat
cggaccaacttcacggtcaacgtaatggagctgagcccgagtggaccactgaaggtgggc
tactggaatgagtatgagaactatgtgaacacagcggtatacacgccagtggttgaagaa
ttcttcggactgcaaaacaggacctacatagtgaccactatccttgaatctccatatgtg
atgctaaagaagaaccatgagcagctggtggggaacgataagtatgagggctattgtgtg
gagctggccgccgagatcgccaagcatgtgggctacacctataagctagaggtcgtaagc
gatggcaagtacggagccagagatgctgagtccaagatgtggaacgggatggtgggcgag
ctggtttatgggaaagcagacgtggcagtagccccattgaccatcaccctggtgagagag
gaggtgatcgacttctccaagcccttcatgtccctaggcatctccatcatgatcaagaag
cctaccaagtccaaacctggagtattttccttcctggatcctctggcctacgagatctgg
atgtgcattgtgtttgcctacatcggcgtgagcgtggttctcttcctggtcagccgcttc
agcccgtacgagtggcagggggacgactcagatggggaggagggtcaagagcagcagcag
agaccgcagcacaaccagccatcgtcctccagtcccaggagagagccaggtcagtcccag
tcccaacagggccaaaaccagggccaaggacagggacagggacaggggcagggcgaaggg
cacaccaatgagtttgggatattcaacagcttgtggttctcgctgggcgccttcatgcag
cagggctgtgacatctcaccaaggtccctctctggtcgcattgtggggggcgtgtggtgg
ttcttcaccctcatcatcatctcctcctacacggctaacctggctgccttcctcacagta
gagaggatggtgtcgcctatagagagtgctgaggacctggccaagcagacggagatcgcc
tatggtaccttagacggaggctccaccaaagagttcttcaggagatcgaagattgccgtg
tttgagaagatgtggtcctacatgaagtctgccgacccgtcagtgtttgtgaagaccaca
gacgagggcgtggtacgggtcaggaagtccaaagggaggtatgcctacctgctggagtcc
accatgaacgagtacatcgagcagaggaaaccatgtgacactatgaaggtgggcggaaac
ctggactctaaaggatacggcatcgccactcccaagggatcagcactaagaaacccagta
aacttggcagtgttaaaactgaacgagcagggcctgttggacaaattgaaaaacaaatgg
tggtacgacaagggcgaatgcggcagcgggggaggtgattccaaggacaagaccagtgct
ctgagcctcagcaatgtggctggggtgttctacatcttaattggagggctggggctggct
atgctcgtggccttggtcgagttctgttacaagtccaggattgagtccaggaggatgaag
caaatcattgatgcggccatgctgagctccaccctgagcaggatgaccaggacagggagt
gggggagagaacggacgggtggtcgcccatgacttccccaaagctgcacagactctcccc
tgcatgagccaggccgcaggcatgggcctgagcaccacaggcatgtga
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