Coregonus clupeaformis (lake whitefish): 121574113
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Entry
121574113 CDS
T08357
Name
(RefSeq) eukaryotic initiation factor 4A-I
KO
K03257
translation initiation factor 4A
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121574113
03012 Translation factors [BR:
cclu03012
]
121574113
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121574113
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
121574113
mRNA cycle factors
Stress granule specific factors
121574113
Translation factors [BR:
cclu03012
]
Eukaryotic type
Initiation factors
eIF-4
121574113
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121574113
Exosomal proteins of bladder cancer cells
121574113
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
CMS1
AAA_22
UvrD-helicase
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
121574113
NCBI-ProteinID:
XP_041742652
LinkDB
All DBs
Position
9:55517266..55542875
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AA seq
409 aa
AA seq
DB search
MSADYEERDLSNRDNGPEGMEPDGIIESNWNEIVDSFDEMALRETLLRGIYAYGFEKPSA
IQQRAILPCIKGFDVIAQAQSGTGKTATFAISILQQIDIELKGTQALVLAPTRELAQQIQ
KVILALGDYMGASCHACIGGTNVRNEVTKLQAEAPNIVVGTPGRVFDMLNRKFLSSKYIK
MFVLDEADEMLSRGFKDQIYEIFQKLGTSTQVVLLSATMPQDVLEVTKKFMREPIRILVK
KEELTLEGIRQFYINVEKEEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDF
TVSALHGDMDQKERDLIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYI
HRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTTVEEMPMNVADLI
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcagattatgaagagagagacctctccaacagagacaatggccctgagggcatg
gagccagatggcatcattgagagtaactggaatgagattgtggacagcttcgatgagatg
gccctgcgtgagactctcctgagaggaatctatgcctatgggtttgagaaaccctctgcc
attcagcagagggccatcctcccttgtatcaagggttttgatgtcattgcacaggcccag
tccggcacagggaagactgccactttcgccatctccatcctacagcagattgatattgag
ctaaagggcacccaggccctagtcctcgctcccacccgagagttggctcagcagatccag
aaggtgatcctggccctcggcgactacatgggagcctcctgccatgcctgtatcggcgga
accaacgtccgcaacgaggtgacaaaactccaggctgaggctcccaacatagtggttgga
actccaggccgcgtgttcgacatgttgaaccgcaagttcctctcttctaagtacatcaag
atgtttgtcctggacgaagctgatgagatgttgagccggggtttcaaggaccagatctac
gagattttccagaagcttggcactagtacacaggtggtgctcctgtctgccaccatgcct
caggatgtcctggaggtcaccaagaagttcatgcgtgagcctatccgtatcttggtgaag
aaggaggagctcaccctggagggtatccgccagttctacatcaacgtggagaaagaggag
tggaagctggacaccctgtgtgatctgtacgagaccctgaccatcacccaagctgtgatc
ttcatcaacacccgccgaaaggtggactggctgactgagaagatgcacgccagggacttc
acagtctctgccctgcacggtgacatggaccagaaggagagggacctgatcatgagggag
ttccgctctggctccagccgtgtcctcatcaccacagatctgctggcccgtggaattgat
gtccagcaggtgtctctggttatcaactatgacctgccgaccaatcgtgagaactacatt
cacaggatcgggagaggaggccgtttcggcaggaagggtgttgccatcaacatggtgact
gaagaggacaagcgcacactccgggacattgagacattctacaacaccacagtagaggag
atgcccatgaatgtggctgacctgatctag
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integrated database retrieval system
