| Entry |
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| Name |
(RefSeq) transcription initiation factor TFIID subunit 6-like
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| KO |
| K03131 | transcription initiation factor TFIID subunit 6 |
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| Organism |
cclu Coregonus clupeaformis (lake whitefish)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:cclu00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121574122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:cclu03021]
121574122
03036 Chromosome and associated proteins [BR:cclu03036]
121574122
Transcription machinery [BR:cclu03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
121574122
Coactivators
SAGA/TFTC/STAGA complex
121574122
Chromosome and associated proteins [BR:cclu03036]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
121574122
STAGA complex
121574122
TFTC complex
121574122
SAGA complex
121574122
SLIK complex
121574122
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
9:56674980..56690380
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| AA seq |
638 aa
MAEERRPKQCTVVLPTESMKAMAESIGVGQLQEESCAALSEEVSYRIKEIAQDALKFMHH
GKRRKLTTSDIDHALKLKNVEPLYGFQSQEFIPFRFASGGGRELHFYEEKEVDLSDIINT
PLPRVPLDVSLKAHWLSIEGVQPAIPENPPPAPKEQQKAESTEPLKVVKPGQEEEGGSIQ
KGQGATSAEAKGKKEGLMRMKPRSTHELSVEQQLYYKEITEACVGSCEAKRAEALQSIAT
DPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYLHELIPAV
VTCIVSKQLCLRPDVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKTFTKSWLDEKT
QWTTRYGCIAGLSELGPDVIKTLILPRLNVEGARIKAVSDGPVVSNIDKIGADHVQSLLL
KHCASVIAKTRPLPDNMEQYRADYGYLGPMLCSHVVKARAQAALQAQQVNRTTLTITQPR
PTLTVSQSGIGGSGGSRTPSIIKVPSSLTLMSTRPGTPTQPSPPATKYIVMATSAGASST
QQVITLSSSSASSVTSTVASATSTLQPLVKLESRGAGGLGVSRPLQKYIVVSLPSSASSS
LESKSGMLPPSSSSPISLEAGMKMDRSDSPGASTQSPH |
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| NT seq |
1917 nt +upstreamnt +downstreamnt
atggcggaggagcggaggccgaagcagtgcactgtggttctgcccactgagtccatgaag
gccatggcagagtccataggagtggggcagctacaggaggagagctgtgccgccctgagc
gaggaggtcagctacagaataaaggagatcgcccaggacgcgttgaagttcatgcaccac
ggaaagagacgtaaactgacgaccagcgacatagatcatgctcttaaactgaagaatgta
gagcctctgtatgggttccagtcgcaggagttcatcccgtttcgcttcgccagcggagga
gggagagagcttcacttctacgaggagaaagaggtggacctcagtgacatcatcaacaca
cccctccctagagtcccacttgacgtttcgctcaaagctcactggttaagtattgaaggt
gtccagcctgctataccagagaacccacccccagcccccaaagagcagcagaaggctgag
tctacagagcccctcaaggtggtcaagcctggtcaggaggaggaggggggctccatccag
aagggccagggagctacatctgcagaggctaaaggtaagaaggagggtctgatgaggatg
aagccccgcagtactcacgagctctcagtggaacagcagctctactacaaggagatcaca
gaggcctgcgtcgggtcctgtgaggccaagagagctgaggctctacagagtattgctaca
gaccctgggctctaccagatgctccccagattcagcacttttatctctgagggggtccgt
gtgaacgtggtgcagaacaacctggccctgctcatctacctgatgaggatggtcaaggcc
ctcatggacaaccccacgctttacctagagaaatatctgcatgagttgatcccagcggtg
gtgacgtgtatagtgagtaagcagctgtgtttgcggcctgacgtggacaaccactgggca
ctgagggacttcgctgcccgtctcatggcccagagctgtaagaccttcagcactaccacc
aacaacatccagtcacgcatcaccaagaccttcaccaagagctggttggatgagaagacc
cagtggacgacacggtatggctgcatcgctggactgtctgaactaggacctgacgtgatc
aagacgttgatcctgcccaggctcaatgtagaaggagctcgtatcaaagctgtgtctgat
ggacccgtggtctccaatatcgataagataggagcagaccacgtccaaagccttttactg
aaacactgtgccagcgttatcgccaagactcgtcccctgcctgacaacatggagcagtac
cgggcagactacggttacctggggcccatgctctgttcccacgtggttaaggcccgggcc
caggcagcactacaggcccagcaggtcaacagaactacactcaccatcacacagcctcgg
cccaccctaacggtgtctcagagcgggataggagggtcgggggggtcccgtacccccagc
atcatcaaggttcccagctccctcaccctcatgtccacccgaccgggcaccccaacacag
ccatcgcccccggcaaccaagtacatcgtcatggcaaccagtgcaggggcatcctccacc
cagcaggtgatcaccctgagttcctcctcggcctcctcagtgaccagcacggtcgccagc
gctacctccaccctgcagcctctggtcaagctggagtccagaggggccggcggcctaggg
gtgtcacgacccctccagaagtacattgtggtgtccctcccatcgtctgcctcttcctcc
ctggagagtaagagtggcatgctccctccctcctcttcctctcccatctcgctggaggcc
gggatgaagatggatcgctcagactctcccggggccagcacacagtctccgcactga |
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