Coregonus clupeaformis (lake whitefish): 121574122
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Entry
121574122 CDS
T08357
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121574122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cclu03021
]
121574122
03036 Chromosome and associated proteins [BR:
cclu03036
]
121574122
Transcription machinery [BR:
cclu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
121574122
Coactivators
SAGA/TFTC/STAGA complex
121574122
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
121574122
STAGA complex
121574122
TFTC complex
121574122
SAGA complex
121574122
SLIK complex
121574122
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CENP-S
CBFD_NFYB_HMF
Bromo_TP
Motif
Other DBs
NCBI-GeneID:
121574122
NCBI-ProteinID:
XP_041742665
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All DBs
Position
9:56674980..56690380
Genome browser
AA seq
638 aa
AA seq
DB search
MAEERRPKQCTVVLPTESMKAMAESIGVGQLQEESCAALSEEVSYRIKEIAQDALKFMHH
GKRRKLTTSDIDHALKLKNVEPLYGFQSQEFIPFRFASGGGRELHFYEEKEVDLSDIINT
PLPRVPLDVSLKAHWLSIEGVQPAIPENPPPAPKEQQKAESTEPLKVVKPGQEEEGGSIQ
KGQGATSAEAKGKKEGLMRMKPRSTHELSVEQQLYYKEITEACVGSCEAKRAEALQSIAT
DPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYLHELIPAV
VTCIVSKQLCLRPDVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKTFTKSWLDEKT
QWTTRYGCIAGLSELGPDVIKTLILPRLNVEGARIKAVSDGPVVSNIDKIGADHVQSLLL
KHCASVIAKTRPLPDNMEQYRADYGYLGPMLCSHVVKARAQAALQAQQVNRTTLTITQPR
PTLTVSQSGIGGSGGSRTPSIIKVPSSLTLMSTRPGTPTQPSPPATKYIVMATSAGASST
QQVITLSSSSASSVTSTVASATSTLQPLVKLESRGAGGLGVSRPLQKYIVVSLPSSASSS
LESKSGMLPPSSSSPISLEAGMKMDRSDSPGASTQSPH
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggagcggaggccgaagcagtgcactgtggttctgcccactgagtccatgaag
gccatggcagagtccataggagtggggcagctacaggaggagagctgtgccgccctgagc
gaggaggtcagctacagaataaaggagatcgcccaggacgcgttgaagttcatgcaccac
ggaaagagacgtaaactgacgaccagcgacatagatcatgctcttaaactgaagaatgta
gagcctctgtatgggttccagtcgcaggagttcatcccgtttcgcttcgccagcggagga
gggagagagcttcacttctacgaggagaaagaggtggacctcagtgacatcatcaacaca
cccctccctagagtcccacttgacgtttcgctcaaagctcactggttaagtattgaaggt
gtccagcctgctataccagagaacccacccccagcccccaaagagcagcagaaggctgag
tctacagagcccctcaaggtggtcaagcctggtcaggaggaggaggggggctccatccag
aagggccagggagctacatctgcagaggctaaaggtaagaaggagggtctgatgaggatg
aagccccgcagtactcacgagctctcagtggaacagcagctctactacaaggagatcaca
gaggcctgcgtcgggtcctgtgaggccaagagagctgaggctctacagagtattgctaca
gaccctgggctctaccagatgctccccagattcagcacttttatctctgagggggtccgt
gtgaacgtggtgcagaacaacctggccctgctcatctacctgatgaggatggtcaaggcc
ctcatggacaaccccacgctttacctagagaaatatctgcatgagttgatcccagcggtg
gtgacgtgtatagtgagtaagcagctgtgtttgcggcctgacgtggacaaccactgggca
ctgagggacttcgctgcccgtctcatggcccagagctgtaagaccttcagcactaccacc
aacaacatccagtcacgcatcaccaagaccttcaccaagagctggttggatgagaagacc
cagtggacgacacggtatggctgcatcgctggactgtctgaactaggacctgacgtgatc
aagacgttgatcctgcccaggctcaatgtagaaggagctcgtatcaaagctgtgtctgat
ggacccgtggtctccaatatcgataagataggagcagaccacgtccaaagccttttactg
aaacactgtgccagcgttatcgccaagactcgtcccctgcctgacaacatggagcagtac
cgggcagactacggttacctggggcccatgctctgttcccacgtggttaaggcccgggcc
caggcagcactacaggcccagcaggtcaacagaactacactcaccatcacacagcctcgg
cccaccctaacggtgtctcagagcgggataggagggtcgggggggtcccgtacccccagc
atcatcaaggttcccagctccctcaccctcatgtccacccgaccgggcaccccaacacag
ccatcgcccccggcaaccaagtacatcgtcatggcaaccagtgcaggggcatcctccacc
cagcaggtgatcaccctgagttcctcctcggcctcctcagtgaccagcacggtcgccagc
gctacctccaccctgcagcctctggtcaagctggagtccagaggggccggcggcctaggg
gtgtcacgacccctccagaagtacattgtggtgtccctcccatcgtctgcctcttcctcc
ctggagagtaagagtggcatgctccctccctcctcttcctctcccatctcgctggaggcc
gggatgaagatggatcgctcagactctcccggggccagcacacagtctccgcactga
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