Coregonus clupeaformis (lake whitefish): 121574129
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Entry
121574129 CDS
T08357
Name
(RefSeq) F-box only protein 40-like
KO
K10315
F-box protein 40
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121574129
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121574129
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box_4
zf-TRAF_2
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
121574129
NCBI-ProteinID:
XP_041742672
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Position
9:complement(57019833..57074142)
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AA seq
734 aa
AA seq
DB search
MVRPSRPPGHRHCDSCFNKCCKAPVEISVSCVLIPCHLLCGALFHLCKEEEHALLCPNER
VPCLNAGFGCPISMPRSRLAAHLHVCPASVVCCSMEWNRWPAEDAQSHTHTALQENLVKE
EEEGGGHGEALDLAMALRDQHHLFHSLKMKNLFPELTERVEEEEREEQRRRRGRRREKEE
KEREALEAQGVVGGVSFPNRVGCGSPADRGWYGPLPENIQEAVRERDREREEERELTQEE
REELARGRGVGSEGLVGYIWERMFNMERGGCMIAEANQEAGAGGRGQGQASGVRGQETEA
HQSQTLTTTETHALNDAHTDTCPNSQCVACLAGPKKKQMYYYGQLEPMKINTVRTFKIPT
SFTAKHTRIRNPGHWKRVDVAVDTSDLGVEPQDMPIWEEVQASLLCSLEKELRGHLIAES
QSSDALLSDTGTQTYAFLSAPFGRDTSLASLTEDRPLQLHLQLQAKSVTTRHNKTSSAFT
FLCGHSFQRREFPKHFRNVHTDIQMCASGWFEQRCPLAYLGCTYSQRRFQPSTHTATVTY
NQELSSFSLRPSVPASLNEEPQHSKSQPAQEPVSNLRRRRSRGGGGGDWDSLSALPYEVL
YHMTSFLDSLSLSQLALVSRLMREVCSSLLQDRGMVSLLWEKKTYKTGMAKWKAKKVVWQ
FSTLFSPVEAWCFDNDVPSMSDHLKVCPYYEMEPRTERVLLPHIVNNKINTDTQSKSNSL
VTLFQKKKTLNSVS
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggttcgtccttcccgcccacctggtcaccgccactgtgacagctgtttcaacaagtgc
tgcaaggcccctgtggagatctcggtgtcatgtgtgctcatcccctgccacctgctgtgt
ggcgccctcttccacctgtgcaaagaggaggagcatgcgctgctctgccccaatgagagg
gtgccatgcctaaacgcgggcttcggctgtccaatcagcatgccccgttccaggctggcg
gcgcacctgcacgtctgtccagccagcgtggtgtgctgctccatggagtggaaccgctgg
ccagccgaggacgcccagtcacacacacatacggccctgcaggagaacctagtgaaggaa
gaggaggagggaggaggacacggggaggcgctggacctggccatggctctgagagatcag
caccacctgttccactccctgaagatgaagaatctcttccctgagctgactgagagggtg
gaagaagaggagagggaggagcagaggagaaggcgggggaggaggagggagaaggaggag
aaggagagggaggccctggaggcacagggagtggttggaggagtgtctttccctaacagg
gtaggctgtgggtctcctgctgatcgaggatggtatggacccctccctgagaatattcag
gaggcggttagggagagggacagagagagggaggaggagagagagctgacccaggaggag
agggaggagctggccaggggaaggggggtaggatcagagggcctggtgggctacatctgg
gagcgcatgtttaacatggagaggggaggctgcatgatagctgaggctaaccaagaggca
ggggcagggggcagaggtcagggtcaagcatcaggggttagaggtcaagagacggaggca
catcagtcacagaccctgaccaccacagagacacacgcacttaatgacgcacacacagac
acatgccccaactcccagtgtgtggcctgtctggccggccctaagaagaagcagatgtat
tactacggccagctggagcccatgaagatcaacacagtgaggacctttaagattcccacc
agcttcacggccaaacacacacgcatcaggaaccccggacactggaagagggtggatgtg
gccgtggacaccagcgacctgggggtggagccacaggacatgccaatctgggaggaggtg
caggccagtctgctgtgttctctggagaaggagctgaggggtcacctaatcgctgagtca
cagtccagcgacgctctcctgagcgacacggggacgcagacctacgccttcctgtcagct
ccgttcggtcgtgacacctcattggccagtctgacggaggaccgccccctccagctccac
ctccaactgcaggcgaagagtgtgacgacccgacacaacaagactagctccgccttcacc
ttcctctgtggacactccttccagcgcagagagttccccaagcacttcaggaacgtgcac
accgacatacagatgtgcgctagtggctggtttgagcagaggtgtcccctggcctacctg
ggctgcacctacagccagaggaggttccagccctccacacacaccgccaccgtcacctac
aaccaagagcttagtagcttcagcctgagacccagtgtccctgcctctctaaatgaggaa
ccccaacactccaagtcccagcctgctcaagaaccagtctcaaacctcaggaggcgaagg
tcgaggggaggaggaggaggggactgggactctctgagcgctctgccctacgaggtgctg
taccacatgaccagcttcctggacagcctgtccctgtcccaactggccctggtttcccgc
ctcatgagggaggtgtgttcctctctgctgcaggacagggggatggtctccctcctctgg
gagaagaagacctacaagactggcatggccaagtggaaggccaagaaggtggtgtggcag
ttcagtacactgttctctccagtggaagcatggtgtttcgacaacgatgtaccctccatg
tcagaccacctgaaggtgtgcccttactatgagatggagcccaggaccgagcgtgtgctc
ctgcctcacattgtcaacaacaaaataaacacagacacacaaagcaagagcaatagtctg
gtcaccctgttccagaagaagaagactttgaatagtgtttcataa
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