Coregonus clupeaformis (lake whitefish): 121574132
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Entry
121574132 CDS
T08357
Name
(RefSeq) CAP-Gly domain-containing linker protein 1-like isoform X1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
121574132
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121574132
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121574132
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
121574132
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
121574132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
ACBP4_C
Prefoldin_2
Pox_A_type_inc
SlyX
Motif
Other DBs
NCBI-GeneID:
121574132
NCBI-ProteinID:
XP_041742678
LinkDB
All DBs
Position
9:26427193..26477667
Genome browser
AA seq
877 aa
AA seq
DB search
MSTGKPSGIKPPSKITRPTGLPTRTSPSSAASKPVPPEKSPTQDGAVDYQVGEKVWVNGN
KPGYVHFLGGTQFAPGQWAGIILDEAIGKNDGSVAGVQYFQCEDGRGIFTRPSKLTKTAL
PEREANGGQPNPGVTGANSPSSAAAGAATTTGNSTKTPLSRTVTGSGSVSNLSETDSAKK
TRRELRLGDRVLVGGTKAGVVRFMGETDFAKAEWCGVELDEPLGKNDGAVAGTRYFQCLP
RYGLFAPVHKVTRIGFPSTLAKAKASSRRHSTMKRSPSASSMSSLSSVTSSVSGKPSRAG
LLTETSSRYARKISGTTALQEALKEKQQHIEQLLAERDMERGEVAKATSHAGEVQQELSL
LTKVQEQYAREMEDKLDQLHKLVETADRDKVELLSQLEEEKRKVEDLQFTVEEACITKGD
LETQTKLEHAHSKELEQSLLFEKTKADKLQRDLEDTRVATVSERSRIMELEREVAELQLR
LCSSQQTVGAVSLSPEELSNLKARAQSQEKKISELSVDLDSRQKQLHSVEEDKSSLEQQL
TSLRQKLDAADKDNKRKAQTLQELEKRGEQMGKEREAQREENQRKEKELQDRLTQAAESS
ERTAHSLEQLTNEKTVLEAQLEALKQQNSKFQEELSLSQERSSSESQHIRTLCKEIAADR
ETLSNQETGEERNFQKTDEDKELETLRNEIAVLRGENAMAKTLQTAVEMLERDKAQLQER
VTSLEQRLMGRQVSEGGDSGVPSSGDTALDQLREEKEFAEGQINFLNSVIVDLQRKNEEL
KVKLKKMALAEFNGNDGTDGLEEGGSKKDKKAPPRLFCDICDCFDLHDTEDCPTQAQSPD
SVPHSSFKGKPADQRPYCDICEAFGHSTESCQEDQTF
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaggcaagcccagcggaatcaagccccccagtaagataaccaggccaactggg
ttaccaacacgtacctccccttcctctgctgcttccaagcctgtgccccctgagaagtct
cccacccaggatggagcagtggactaccaggtgggggagaaggtgtgggtcaacggtaac
aagccaggatatgtccacttcctggggggtacacagtttgccccgggccagtgggccggc
atcatcctggatgaggctatcgggaagaacgacgggtcggtagcgggggtccagtacttc
cagtgtgaggacggaagagggatattcacacggccctccaagttgaccaagacagcattg
ccggagagggaggccaatggtgggcagcctaaccctggcgtgacaggggccaactcccct
agctctgctgctgctggggctgctactaccactggtaacagcaccaagacaccgctgagt
agaaccgtgacgggcagtgggtcagtgtccaacctctctgagactgactcagccaagaag
accagaagagaactgagactgggagaccgcgtgctggtggggggtactaaggcaggggtg
gtgaggttcatgggggagacagactttgccaaggcggagtggtgtggagtggagctggac
gaacctcttgggaagaatgatggagctgtggctggaaccaggtatttccagtgcctgccg
cgatacggactgtttgctccagtccataaagtgactcgtatcggcttccccagcaccctg
gctaaagccaaggcctcctctcggagacactccaccatgaagaggagtcccagcgcctcc
tccatgagctccctgagctctgtcacttcctctgttagtgggaaacccagccgcgctggc
ctgttgacagagacctcgtcgcggtatgctcgtaagatctctggcaccacagcgctacag
gaagccctgaaggagaagcagcagcacatcgaacagctattggccgagagggacatggaa
cgcggggaggtggccaaggcaaccagccatgctggagaggtgcagcaggaactgtctctg
ctcacgaaggttcaggagcagtatgctagggagatggaagataagctggaccagttgcat
aaactggtggagacggcagacagagacaaggtggagctgctcagccaactggaggaggag
aagaggaaagtggaagacctgcagttcactgtggaagaggcttgcatcactaaaggtgac
ctagagacgcagaccaagctggagcatgcccacagtaaggagcttgagcagagccttctg
tttgaaaagaccaaagctgacaaactgcagagggacttagaggacactagggtggccaca
gtgtctgagcggtccaggatcatggagctggagagagaggtagcggagctgcagttgaga
ctatgctcctcccagcagacagtgggcgctgtatcactgtcaccagaggagctcagcaac
ctcaaggcccgggcccagtcccaggagaagaagatcagtgaactgagtgtggatctggac
agcaggcagaaacagctacactcggtagaggaggacaagagctccctggaacagcagcta
accagcctgagacagaaactggacgcagcagacaaagacaacaagagaaaggcacaaacc
ttgcaagagctggagaagagaggagagcagatgggaaaagagagggaagcacagagagaa
gagaaccaacgcaaagagaaagagcttcaggatagactgacgcaggctgctgagtcatca
gagaggaccgcccactcactggagcagttgaccaatgagaagacagtgctagaggctcag
ctcgaggcgctgaaacagcagaattccaaattccaggaagaactcagtctctcgcaggag
cggagcagctcagaaagccagcacatcagaactctgtgcaaggaaattgctgcagacagg
gaaactctgtccaaccaggagacaggggaggagagaaacttccagaagacagatgaggac
aaagagctggagactctgaggaatgagatcgcggtgctacgaggtgagaacgccatggcc
aagacgctgcagactgccgtggagatgctggagagagacaaggcacagctacaggaacgc
gtcaccagcctggagcagaggctcatgggacggcaggtctccgagggaggggacagtgga
gtgccttcctcaggtgacacagctctggaccagttgagagaagagaaggagtttgcagaa
ggacagattaacttcctgaacagtgtgatcgtggacctgcagaggaagaatgaggagttg
aaggtcaagctgaagaagatggctctggcggagttcaacggcaatgacggcactgatggt
ttggaggagggtggatctaagaaggacaagaaggctcctcctcgtctgttctgtgatatc
tgtgactgttttgacctccatgacacagaggactgtccgacccaggcccagagccctgac
tcagtcccccactcttccttcaagggcaaacccgccgaccagcggccgtactgcgacatc
tgtgaggccttcggtcactccacagagtcctgccaggaagaccagaccttctag
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