Coregonus clupeaformis (lake whitefish): 121574159
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Entry
121574159 CDS
T08357
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM23 isoform X1
KO
K07963
tripartite motif-containing protein 23 [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121574159
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
cclu04031
]
121574159
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121574159
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
121574159
GTP-binding proteins [BR:
cclu04031
]
Small (monomeric) G-proteins
Arf/Sar Family
Others
121574159
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arf
Roc
Ras
SRPRB
G-alpha
zf-RING_UBOX
zf-RING_5
Gtr1_RagA
zf-B_box
zf-RING_2
MMR_HSR1
zf-C3HC4
CEBP_ZZ
FemAB
Motif
Other DBs
NCBI-GeneID:
121574159
NCBI-ProteinID:
XP_041742729
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All DBs
Position
9:25559304..25567112
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AA seq
594 aa
AA seq
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MAAAVGVNKQGTAATMDVCVRHGRGATSSTVKVLECGVCEDVFSLQGDKVPRLLLCGHTV
CHDCLTRLPLHGRAIRCPFDRQVTELGDSGVWGLKKNFALLELLERLQNGASSQSSMVED
ALTGIGESIIRCDEDESHTASMYCTVCATHLCADCSQLTHSTRTLAKHRQVPLADKPHEK
TLCPQHQVHAIEFVCQEELCQPGPLMCCVCKEYGKHQGHKHAVLEAEANQIRASILDMAH
CIRTFTEEVSEYSRKLVGIVQQIEGGERIVEDSIGMAHTEHSSVGVPQVPGTAESARSCV
RAYFADLHETLCRQEEMALSVVDAHVRERLIWLRQQQEDMTVLLSQVSTACLHCEKTLQQ
DDCRVVLAKQEINRLLETLQKQQQQFTELADHIQLDAGIPVTFTKTTLFSLFQDNRVHIG
PKMEIRVVTLGLDGAGKTTILFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGGKHK
LRPLWKHYYLNTQAVVFVIDSCHRDRLMEAHSELAKLLTEKELRDALLLIFTNKQDVPGA
VSVEEMTELLSLHKLCCGRSWHIQGCDARSGTGLHEGLDWLSRQLVAAGVLDVA
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgctgtgggtgtaaacaagcaggggaccgcagcaacgatggacgtctgtgtc
cggcacggcagaggggccacaagtagcacagtgaaggtgttggagtgtggggtgtgtgag
gatgtattctctctccagggggacaaggtcccccggctgctgctctgcggtcacacagtc
tgtcatgactgtctgacccggctgcccctgcatggtagagccatccgctgccccttcgac
agacaggtcacagagctgggggactctggtgtgtggggtctgaagaagaactttgccctg
ctggagcttctggagaggctgcagaatggagcgtccagccagtcgagcatggtagaggac
gccctcacaggcataggagagtctataatccgctgtgacgaggacgagagccacacggcg
tctatgtattgcacggtgtgtgccacccacctgtgtgccgactgctcccagctcacccac
tccacccgcaccctggccaagcaccggcaggtacccctggcagacaagccccacgagaag
acgctgtgcccgcagcaccaggtccacgccatcgagttcgtctgtcaggaggagctctgc
cagcctgggccgctcatgtgctgcgtgtgcaaagagtacggcaagcaccagggacacaag
catgcagttctggaggcagaagccaatcagatccgtgcctctatcctggacatggcccac
tgtatccggacgttcacagaggaggtgtcggagtattccaggaagctggttgggatcgtg
cagcagatcgagggaggagaacggatagtggaggacagcatcggcatggcacacactgaa
cattcgtctgtgggtgttccccaggtcccaggcacggcagagagtgcacggtcctgcgta
cgggcgtacttcgctgatctccacgagacgctgtgcagacaggaggagatggcgctcagc
gtagtggacgcccacgtcagggaaaggctcatctggctccggcaacagcaggaagacatg
accgtcctgctgtcccaggtctccacagcctgcctgcactgcgagaagacactgcagcag
gatgactgcagagtggtcctggccaagcaggagatcaacagactgttggagactctacag
aaacagcagcagcagttcactgagctggctgaccacatccagctagatgctggtatcccc
gtcacattcaccaagactacattgttttctctgttccaggacaaccgggtccacatcggc
cctaaaatggagatccgggtggtaaccctgggattggatggtgccgggaaaaccaccatc
cttttcaagctgaaacaggatgagtttatgcagcccatccctaccataggttttaatgta
gagacagtggagtataagaatctcaagttcaccatctgggacgttggtgggaaacataag
ctacggcctctctggaagcactattacctgaacacacaagcggtggtgtttgtgattgac
agctgtcacagggacaggctgatggaggcccacagtgaactggccaaactgctgacagag
aaggagctgagagacgccctgctgctcatcttcaccaacaaacaggatgtccctggggct
gtgtcggtggaggagatgacagagctgctgagtctccacaagctgtgctgtgggaggagc
tggcacatccagggatgtgacgcccgcagtggcacggggctccacgagggcctggactgg
ctgtcccgacagctggtggctgcaggcgtactggacgtggcctag
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