KEGG   Coregonus clupeaformis (lake whitefish): 121574169
Entry
121574169         CDS       T08357                                 
Name
(RefSeq) WD repeat-containing protein 36-like
  KO
K14554  U3 small nucleolar RNA-associated protein 21
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    121574169
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cclu03009]
    121574169
Ribosome biogenesis [BR:cclu03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    121574169
SSDB
Motif
Pfam: Utp21 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WD40 WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd EIF3I ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_VPS8 WDR90_beta-prop_4th NBCH_WD40 Beta-prop_LRRK2 Beta-prop_HPS5 Beta-prop_WDR19_1st Zn_Ribbon_Topo
Other DBs
NCBI-GeneID: 121574169
NCBI-ProteinID: XP_041742751
LinkDB
Position
9:complement(25066870..25086197)
AA seq 894 aa
MPVCSKKGSVIFSGFRALGLYSNHLPHVVRYHKKHREFYVVTAVGNCFHTYNVKKLGIVA
VSNTVPEDISYLAADRMLVYVANGRKVTAFARNKEVVHTYTGHGADVHLLLPFGDHIISV
DRDNVVIVWDVESEEEYLQITFDKVSFEVSAVMHPSTYLNKILFGSSQGGLQLWNVKSNK
LLHTFPGWASGITVLQQTPAVDVVGVGLSSGQIIIHNIKFDESLMKFQQDWGPVTSLSFR
TDSHPVMAAGSPVGHIGLWDLEEKKLVCQMRDAHNTAIAGLTFLHGEPLLITNGADNGIR
VWIFDTAGGGGRLLRSRLGHSAPPTKVQHHGLNGHHILSAGQDGTLQSFSTVHERFNRSL
GRGSINKKKSKKKSLRYDELKLPAITTFASESARQSDWDSIVACHRGYLMTTTWNYQKGS
MGAHRLEPERFNKNRALNVHATAVDITSCGNFVVVGLSSGHIDVYNMQSGMHRGQYGEDK
AHKGPVRGVSVDGLNQLTISAGADKLVKIWKFKSRKLVHSIDLGTSPATTHLHRDSGMLA
IALDDFTLNVLDMETKRIVRKFPGHRGQVNDMAFSPDGRWLITSAMDCTIRTWDLPSGCL
VDCFLVDSAAGSLTMSPTGDFLASSHVDCLGIYLWSNNTLCNMVSLRPLPSDYVPTVIML
PGTCPNQDEEGEEDDDLNSEMIEYESPEQLDQQLVTLSLLPDSRWKNLLHLDIIKKRNKP
KEPPKVPKAAPFFMHTIPGLIPQFAPSEGSNQEEQSKIVNFGVLAQKSHFYQQLESATLS
NKYDGPVGMLKEMGPSGIDAELRGLAPDMGGDVSVLQGFLKMVASMLNSKRDFDLAQAYL
ALFLKLHLRLITQEPELMEEASRVSEKLEETWTSMQTLFNQSLCLLSYTKSALL
NT seq 2685 nt   +upstreamnt  +downstreamnt
atgcccgtgtgcagtaaaaagggaagtgttatattttcaggctttagagcattgggactg
tattcgaatcacctcccacacgtggtacggtaccataagaaacacagagaattctacgtt
gtgacagccgttggaaactgtttccacacgtacaatgtcaagaaacttggaatcgttgct
gtcagtaatacagttccagaggacatatcatacctagcagctgatcgcatgctggtctat
gttgcaaatgggagaaaagtaacagcatttgctaggaacaaagaggttgttcacacatac
accggccatggagctgatgttcacctcctgctgcctttcggggatcacatcatttctgtg
gacagggacaatgttgtcattgtctgggacgtggagtcagaggaggagtacctgcagata
acatttgacaaagtgtcatttgaagtgtctgctgtaatgcacccaagcacttacctgaac
aagatcctgtttgggagtagccaaggaggtctccagctctggaatgtcaaatccaacaaa
ctcctgcacaccttccctggatgggcatcgggaatcacagtgcttcagcagaccccagct
gtggacgttgtgggcgttggcctatcatcgggtcagatcatcatccacaacatcaagttt
gatgagtcactgatgaagttccagcaagactggggcccagtcacttcattgtccttcaga
acagatagtcatccagtaatggcggctggtagtcctgtcggacatattggactgtgggat
ctagaagagaaaaagcttgtgtgtcagatgagagatgcccataacacagctatcgctgga
ctaacattcctccatggcgagcctcttctcatcaccaatggggctgataacggcattcgg
gtgtggatctttgacacggcgggcggaggaggccgtctactcaggagtcgtctgggacac
agcgccccgcccactaaggtccagcaccacggcctgaacggacatcacattctcagtgct
ggtcaagatggtactctgcagtcgttctccactgttcatgagagattcaacaggagttta
ggacgtggttccatcaacaagaagaaatccaaaaagaaaagcttgaggtatgacgaactg
aagcttcctgccatcacaactttcgcctcagagagtgcccgtcagagtgattgggacagt
atagtggcgtgtcaccgagggtacctcatgacgaccacctggaactatcaaaagggcagc
atgggagcacacaggctggaacccgaacgcttcaacaagaaccgtgctctcaacgtccac
gctacggcagtagatatcacatcatgtggtaactttgtagtggtaggactctcatctgga
cacattgacgtttacaacatgcagtccggcatgcatagaggtcaatatggagaggacaaa
gctcacaaggggccggtgcgcggcgtgtccgtggatggactcaaccagctgaccatcagt
gccggagctgacaaactggtcaagatctggaagttcaaatctaggaagctggtccactcc
attgacctgggcacctcacccgccaccacacacctgcaccgggacagtggtatgctggcc
atcgctctggacgacttcacgctgaatgttctggacatggagaccaagaggattgtccgt
aagttccctggccatcgaggacaggtcaatgacatggctttcagcccagacgggcgctgg
ttgataacatcagccatggactgtaccatcaggacatgggacctcccctccggctgcctg
gtggactgcttcttggtagactctgctgcgggcagtctgaccatgtcaccaactggggac
tttctggcctcctcacatgtcgactgcttggggatatacttatggtccaacaacacgctg
tgcaatatggtgtcactgcgccccctgccttcagactacgtccccactgtgatcatgctg
ccaggaacctgtccaaaccaagatgaagagggagaggaagatgatgatctcaactctgag
atgatagagtatgagtctccagagcaactggaccagcagctggttaccctctctttgctg
cccgactctcgctggaagaacctgctgcacctcgacatcatcaagaaacggaacaaaccc
aaggagccccccaaggttccgaaggctgcccccttcttcatgcacaccattccaggactg
ataccacagttcgccccctctgaaggctccaaccaggaagaacagtcaaagattgtcaat
tttggagtcctggcacagaagtcccatttctaccaacagctagaatctgccacactcagc
aacaaatatgatggccctgtggggatgctgaaagagatgggtccgtctgggattgatgct
gagctccgagggctggcccctgatatgggtggagatgtctccgtcttacaaggcttcctg
aagatggtggccagcatgctgaactccaagagggactttgatctggcacaggcctacctg
gcactcttcctaaagctacatctcagactgatcacccaggaaccagagctcatggaggag
gcgtctagagtatctgagaaactggaggagacgtggacatccatgcagacacttttcaat
cagagcctgtgtttgctgtcatacaccaagagtgcactgctttga

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