Coregonus clupeaformis (lake whitefish): 121574318
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Entry
121574318 CDS
T08357
Symbol
si:ch211-283g2.1
Name
(RefSeq) sodium- and chloride-dependent GABA transporter ine
KO
K05039
solute carrier family 6 (neurotransmitter transporter, taurine) member 6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121574318 (si:ch211-283g2.1)
Transporters [BR:
cclu02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
121574318 (si:ch211-283g2.1)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
121574318
NCBI-ProteinID:
XP_041742866
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Position
9:40808688..40852866
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AA seq
580 aa
AA seq
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MELDQGKMDQEPGRPTWSRQIEFTLAGIGCAVGLGNVWRFPYLCYRSGGGAFLIPYLLML
LVMGIPLLYMELILGQYMRRGPVHALAKACPLLKGVGLATVAISFIMSTYYNIIITWGLY
YLFSSFQSPLPWQSCNNTWNTPNCTDHVTPNTSSHSSTASQQFFNYRMLERTGGVDESGV
LRWELFLLLLLAWILIYLCIFKGVKSTGKVVYFTALFPYVILLALLINNVQLPGAMEGIR
FFIVPNWEKLLELEVWVNAAAQIFNSIGIGFGSLMAMSSYNNFNNNILKDTLAISITNSL
TSILAGFVIFSAFGYMSHLQNIPVSELAVDGPGLVFVVYPQAFATMPVAPLWAFLFFFML
LCLGLDSQFAMVEVMVTSLMDGFGGPLLKFLRKKEMLVLAVCSTAFLLGIPHVMQVGIYV
FQLMDHYTAIVSLMFLAFFEVLAICGLYGVRRLSANLKEMTGSRPNIFFRVCWMFVAPLL
ITMILVFTIIQFEPARYENYVYPPWAQGIGWVITMASIIWIPLGALHTLWVLPGSFTERL
LKSITPYALENERGGETYPNIAVINSFGRETEKPHIQTNL
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggagctggaccaaggcaagatggatcaggagccaggcaggcccacatggagtaggcag
atagagttcaccctggctgggatcggctgtgctgtggggctggggaacgtatggcggttc
ccttatctgtgttacaggagtggaggaggtgcattcctgattccctacctgctgatgctg
ctggtgatggggattcctctgctctacatggagctgattctgggacagtacatgaggaga
gggcctgttcatgccctggctaaagcctgcccgctgctcaaaggagtgggccttgcgacc
gtggccatctccttcatcatgtctacttactacaacatcatcatcacatggggtctgtac
tacctgttcagctccttccagagcccgctgccctggcagagctgcaacaacacatggaac
acccccaactgcaccgatcacgtaaccccgaacaccagctcacactcctccaccgccagc
cagcagttctttaattataggatgctggagcggacagggggagtggacgagagcggggtg
ctgcgatgggaactcttcctccttctccttttggcctggatcctcatctacctctgcatc
ttcaagggggtcaagtcaacagggaaggtggtatacttcacggctctcttcccgtatgtc
atcctgttagctctgttgataaacaacgtccagcttccaggagctatggaaggcatccgc
tttttcatcgtgccaaactgggagaaactcctggagttggaggtttgggtcaacgctgca
gctcagatctttaactccattgggataggctttggctccctcatggccatgtccagctat
aacaacttcaacaacaacatattaaaagacaccctggctatctccatcaccaactccctg
accagtattctggcaggttttgtcatcttctcggcattcggctacatgtcacatctccag
aacatacctgtcagtgagctggctgtagatggtccaggactggtttttgttgtttaccca
caagcctttgcaacgatgccagtggctccgctgtgggcatttctgttcttcttcatgctt
ctgtgccttgggctggacagccagtttgccatggtggaggtgatggtgaccagcctaatg
gatgggtttggagggcccctgctgaagttcctgagaaagaaggagatgctggttctggca
gtctgcagcaccgcctttctgctggggataccccatgtcatgcaggtggggatctacgtt
ttccagctgatggaccactacacggccatagtgtctctcatgttcttggccttctttgag
gtgttggccatctgcgggctttatggtgtgaggaggctttcggcaaacttaaaggagatg
acaggaagtaggcctaatatcttcttcagagtgtgctggatgtttgtggctcctcttctg
atcactatgatcctggtgttcacaatcatccagtttgaaccagcccgctatgagaactac
gtgtatcccccgtgggctcaggggattggctgggtcatcaccatggcgtccatcatctgg
atcccactcggagctcttcacacactgtgggttctgcccggctccttcactgagagatta
ttgaagtcaatcaccccatatgcactggagaacgagagaggaggagagacttacccaaac
atagcagtcatcaactcctttggtagagaaacagagaagcctcacattcagacaaacctc
tga
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