Coregonus clupeaformis (lake whitefish): 121574416
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Entry
121574416 CDS
T08357
Name
(RefSeq) 5-hydroxytryptamine receptor 3B-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
121574416
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121574416
Ion channels [BR:
cclu04040
]
Ligand-gated channels
Serotonin (5-HT3)
121574416
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
121574416
NCBI-ProteinID:
XP_041742974
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Position
9
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AA seq
455 aa
AA seq
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MIYIFWLLLSSAPLAELVADKPKRSALNQLTRTLLRKYDCGVRPVQNWTRPTLIHIDLIL
QSVLDVDGKTQQVTTSIWYRQIWTDEFLVWDPEEFDGITEISLSSDAIWVPDLIISEFVD
VGESPAIPYVYVNSSGMVKNNKPIQVVSACDLELYAFPFDKQNCTLTFRSWLHSVSEVNL
TLWRSAEEIANDQKSFMDDGEWELLSVPSRYWQLRLDNRDYAHIQFNVLIRRRPLLYVVS
LLIPSIFLMLVDIISFYLPPNSGTRITFKTSILLGYTVFRVNLMNEMPATTIRTPLIGAF
FAVCMALLVLNLSISIFVVKLLHHNEKEVKEMSVSACLLDKYGSSSQTFLESNFTSVKTL
VDVDQCGGYEFDLAPEEDLLSLSEPQESAPRLERLLQEVVALRLYLQEGESDDSAQADWV
ALCCKVDLLLFRVYLLILVVYTSTLLLLWASWSSA
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgatatatatcttctggctcctactaagctcagcccctctggctgaactggtagcagat
aaacccaagaggtcagctctgaaccagctcaccaggaccctcctgcgtaaatacgactgt
ggagtgagacctgttcagaactggaccagacccacgctcatccacatagacctcatactg
cagtcggtccttgatgtggatggaaagacccagcaagtaaccacaagcatttggtacagg
cagatctggaccgatgagttcctggtgtgggaccccgaggagtttgacgggatcactgag
atctccctgtcctctgacgctatatgggtgcccgatctcatcatcagtgaatttgtggat
gtaggggagtcccctgccatcccctatgtgtatgtcaactcgtcggggatggtgaagaac
aacaaacccattcaggtggtgtctgcatgtgacctggagctgtacgccttccccttcgat
aagcagaactgcactctgaccttccgcagctggcttcactcagtgagtgaggtgaacctg
actctgtggaggagtgcggaggagatcgccaatgatcagaagtcgtttatggacgatggc
gagtgggagctgttgtctgtgccctcccgctactggcagcttcgcctggacaacagagac
tatgcccacatccagttcaatgtgttgatccgccggcgccccctgctgtacgtggtgagt
ctgctcattcccagcatcttcctcatgctggtggacatcatcagcttctacctgccgccc
aacagtggcacgcgcatcacctttaagaccagcatcctcctaggctatactgttttcaga
gtcaacctgatgaacgagatgcctgccaccaccatcagaacaccactcataggtgcgttc
tttgcggtgtgcatggcgctgctggtgctgaatctatccatctccatcttcgtggtgaag
ctcctccaccacaacgagaaggaggtcaaggagatgtcagtgtccgcctgcctcctcgac
aagtacggctcgtccagccagaccttcctcgagagcaacttcacctctgtcaaaacactg
gttgacgtggatcagtgtgggggctatgagtttgacctggctccagaggaggacctgctg
tccctgagcgagccccaggagagtgctccacggctggagaggctgctccaggaggtggtg
gccctgcggctctacctgcaggagggggagagtgacgattctgcccaggctgactgggtg
gccctgtgctgcaaggtggacctcctcctgttccgagtctacctgcttatcctggtcgtc
tacaccagcactctgctgctactgtgggccagctggagctctgcatga
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