Coregonus clupeaformis (lake whitefish): 121574417
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Entry
121574417 CDS
T08357
Name
(RefSeq) 5-hydroxytryptamine receptor 3A-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
121574417
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121574417
Ion channels [BR:
cclu04040
]
Ligand-gated channels
Serotonin (5-HT3)
121574417
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Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
121574417
NCBI-ProteinID:
XP_041742976
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All DBs
Position
9
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AA seq
486 aa
AA seq
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MRVSALWTALVLLLIQGTARACTVKKLSNNNGRFANATLVRLSEYLSAGYKKGVRPVRNW
RNCTMVAIDLMVYSILSVDEKNQVLTTYVWYRQEWTDEFLVWNPEDFDDVNQMSIPTANV
WVPDILINEFVDVGKSPDIPYVYVTHYGLVRNYKPIQVVTACTLNIYNFPFDVQNCSLTF
QSWLHTLNDIDLKLMRSAEELKVDKSVFMNQGEWELLHVLSKYKRFSLDNIDSYAEMKFN
VVIRRRPLFYTVNLLLPSIFLMVMDLVGFYLPPDSGERVSFKITLLLGYSVFLIIVSDTL
PATAIGTPLIGVYFVVCMALLVISLTETVLIVRLVHKQDLQPHVPQWLKHLVLERATVLL
CIRNKHSLCSMLSRDSDHLGHYKENNISPARCSHHHHLHHTGDSMERGLGGLSVVRDNTP
PVMDNILHEISSIRGFLEKRDESRDIAKEWLQVGYVLDVLLFRVYLVAMLAYSITLGTLW
SVWQYA
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgagagtttcagcactctggacagcgctggtcttgcttctgatacaaggcaccgcgcga
gcctgcacagtcaaaaaactgagcaataataacggacgctttgccaatgccaccttggta
cgtctctccgagtacttgagtgctgggtacaagaagggtgtgcgacccgttcgcaactgg
cgaaattgcacaatggtggccatcgaccttatggtgtactctatcctcagtgtggatgag
aagaaccaggttctgacaacatatgtatggtacaggcaggaatggacagatgaattcttg
gtatggaacccagaggactttgatgatgtgaatcaaatgtccataccgactgcgaatgtg
tgggtgcctgacatactaattaacgagtttgtggatgtcgggaagtctcctgacattccc
tatgtgtacgtgacccattatggactggtgcgcaactacaagcctatccaggtggtgact
gcctgcactctcaacatctacaacttccccttcgacgtccagaactgcagcctgaccttt
cagagctggctccatacccttaatgacatcgatctcaagctgatgaggagcgcagaggaa
ctcaaagtggataagagtgtcttcatgaaccagggggagtgggagctgctacacgtcctg
tccaaatataaacgcttcagtctggacaacattgactcctatgcagagatgaagttcaat
gtggtgatccgacgcagacctctgttctacactgtgaacctgctgctgccaagcatcttc
ctgatggtgatggacctggtgggcttctacctccctccagatagtggagagagggtgtcc
ttcaagatcaccctgcttctgggctactccgtcttcctcatcatcgtctccgacacactg
cccgccaccgccatcggcacgccgctcataggtgtctactttgtagtgtgcatggccctg
ttggtgatcagcctgacagagacagtgttgatagtgcgtctggtgcataaacaggatctg
caaccccacgtgccccagtggctcaaacacttggtgctggagcgggccacagtcctcctc
tgcatccgcaacaagcacagcctgtgctcaatgctgtccagggactccgaccacctgggc
cactacaaagagaacaacatcagcccagctcgatgcagccaccaccaccaccttcaccac
accggggacagcatggagcggggtctgggtggcctgtctgtggtgcgtgacaacacgccg
cccgtcatggacaacatcttgcatgagatctcgtctatccgcggcttcctggagaagagg
gacgagtcccgggacatcgccaaggagtggctgcaggtgggctacgtgctggatgtgctg
ctcttcagggtctacctggtggccatgctggcctacagcatcaccctggggaccctctgg
tccgtgtggcagtatgcctga
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