Coregonus clupeaformis (lake whitefish): 121574532
Help
Entry
121574532 CDS
T08357
Name
(RefSeq) BDNF/NT-3 growth factors receptor-like
KO
K04360
neurotrophic tyrosine kinase receptor type 2 [EC:
2.7.10.1
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121574532
04020 Calcium signaling pathway
121574532
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cclu01001
]
121574532
Enzymes [BR:
cclu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
121574532
Protein kinases [BR:
cclu01001
]
Receptor tyrosine kinases (RTK)
TRK family [OT]
121574532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
I-set
Ig_3
Ig_2
LRR_8
C2-set_2
ig
LRR_5
LRR_4
LRRCT_2
Haspin_kinase
LRR_9
LRRNT
Motif
Other DBs
NCBI-GeneID:
121574532
NCBI-ProteinID:
XP_041743070
LinkDB
All DBs
Position
9:24934374..24966421
Genome browser
AA seq
803 aa
AA seq
DB search
MGSNVGGYGMARSGIFMVLMGLWRFISACPASCTCTISRIACIDPDPGIEDFPILTLDDM
EMDINITDIYIANQNRLFDINDNSLKYYSNLRNLTVTNTGLTSISSEAFFNNTRLQYLNL
RDNKLSTLSWRTFLNFNITSFPLLSGNPLECVCENMWIKLRLQEDIDSSESQELKCIDDS
GVRRAISRFFLPDCEAPAVEVSPSIFTKTEGSDVTAVCSATGSPAPEISWNLDTLFTSYE
VNVLELQSNLTLSGLSPSDNGRVITCNVENVVGQTEAYLLLNILFCPTILELLEPLRLHH
WCIPFSVTGNPKPKLQWYHQDQELHEQEYIKTEIHESLGSVHHGCLQLANPTHIHNGQYT
LVASNEFGEDRKVIDAHFLLPPDEGDYPSEQPYYPYTTDSPLPPIDDSVAVYVVVGIAGV
ALIVCVLMVIILKYGRNSKFGMKGSSSSVISNDDDSASPLHHVSNGNNTPSSSELSHDAV
IIGMTKIPVIENPQYFRQSGSMLKSDTFVQHIKRHNIVLKRELGEGAFGKVFLAECYNLT
PDQEKILVAVKTLKEGSESGRADFHREAELLTNLQHEHIVTFYGVCVDSDPLIMVFEYMK
HGDLNKFLRSHGPDTVLMADGQHSLMVELTQSQMLHIAQQIAAGMVYLASQHFVHRDLAT
RNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRRFTTESDVWSL
GVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRSCPKEVYDLMLSCWQREPYMRLN
IKEIHSLLQSLAKASPVYLDILG
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgggctccaacgtagggggatatggaatggctcgctccggaatctttatggttttgatg
gggttgtggaggtttatctctgcttgccctgcatcctgcacttgcaccatctcaaggatt
gcttgtatcgatcctgacccagggatcgaggatttccctatccttacgttagatgacatg
gaaatggacatcaatatcaccgatatatacattgcaaatcaaaacagactatttgacatc
aatgataacagcttgaagtactactcgaatctcagaaatctaactgtgacgaatacagga
ctgacttctatctcatcagaagcctttttcaacaatacaagacttcaatatctgaatctg
agagacaataagttgtcaacactgtcctggaggacattcctaaactttaacattacatct
tttcctctcctgtctggtaaccctctggagtgtgtatgtgagaacatgtggatcaaactg
aggctgcaagaggacattgacagttcagagagtcaagagctgaaatgcatagacgacagt
ggagtgaggagggccatctccagattctttctccctgattgtgaggctcccgcagtggag
gtcagtccctctatcttcacaaagacggagggaagtgatgtcacagcagtgtgcagtgca
acagggtctcctgcccctgagatctcgtggaatttggacaccctcttcaccagctatgag
gtcaatgtcttggagctgcagagcaatctgacgctgtcaggtctctcgccttcggacaac
ggcagagtgatcacttgcaatgttgagaatgtagtcggccaaaccgaggcttacctccta
ctcaacatcctcttttgccccactatcctggagctgctggagccattgagactccaccac
tggtgtatccccttcagtgtgaccgggaaccccaagcccaagctgcagtggtaccaccag
gaccaggagctccacgaacaggagtatatcaagactgagatccacgagagccttgggagc
gttcaccatggctgcctgcagcttgccaacccgactcatatccacaacgggcagtatacg
ctggtggccagcaacgagttcggggaggaccggaaagtaatcgacgcccacttcctgctc
ccgccagatgagggcgactatccctcagaacagccatattacccttacaccactgactca
ccactacccccaatagatgacagtgttgcagtgtacgtagtggtgggaatcgctggcgtg
gcattaattgtatgtgttctgatggtgatcattctgaaatacggaagaaactcaaagttt
gggatgaagggctcctcctcctcggtcatcagtaacgacgatgactcagccagtcctctt
catcacgtctccaacggcaacaacaccccgtcgtcctcggagttgagccacgatgcggtg
atcattggaatgacaaagatccctgtcatcgagaacccgcagtatttccgccaatctggc
agcatgctgaaatcggacacgtttgtccagcacatcaagagacacaacattgtgctgaag
cgtgagctgggagagggggcctttgggaaggtgtttctggctgagtgctacaacctgacc
ccagatcaggaaaagatcctggtggccgtcaagacgttgaaagaaggcagcgagagcggc
cgtgctgacttccaccgggaggcggagctactgaccaacctgcagcatgagcacatcgtc
accttctacggcgtgtgtgtggacagcgacccgctcatcatggtgttcgagtacatgaaa
cacggcgacctcaacaagttcctcaggtcccatggtcctgacacggtgctgatggctgat
gggcagcacagcctaatggtggagctgacccagtcccagatgctgcacatcgcccagcag
attgctgcaggcatggtctacctggcctcccagcactttgtccacagagacctggccaca
cgcaactgtctggtgggagagaacctgctggtcaagattggggactttggcatgtccagg
gacgtgtacagcaccgactactacagggtgggtggtcacaccatgctgcccatccgctgg
atgcctccagagagcatcatgtaccggcggttcaccacggagagcgacgtctggagtcta
ggcgttgtcctctgggagatcttcacctatgggaagcagccctggtaccagctctccaac
aatgaggtgatcgagtgcatcacccaggggcgcgtgctgcagcggccgcgttcttgtcca
aaggaggtgtacgacctgatgctgagctgctggcagagagaaccctacatgagactcaac
atcaaggagattcacagcctgctccagagtctggccaaggcctcgcctgtctacctggat
atactgggctga
DBGET
integrated database retrieval system
