Coregonus clupeaformis (lake whitefish): 121574705
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Entry
121574705 CDS
T08357
Name
(RefSeq) poly(rC)-binding protein 2 isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121574705
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
121574705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
121574705
NCBI-ProteinID:
XP_041743182
LinkDB
All DBs
Position
Unknown
AA seq
480 aa
AA seq
DB search
MRLPVSHSHINMNCEPDFEEGGMNVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARI
NISEGSCPERIITITGPTDCVFRAFTLITLKLEEDLTTLVANGTVTSKPPVTLRLVIPAS
QCGSLIGKGGSKIKEIRETTGAQVQVAGDLLPNSTERGVTISGTQDAIIQCVKLICTVIL
ESPPKGATIPYRPSPSPGTVMMAGNQVFETSDYGSHPLFHMAQGGLDLQQVYAVQNQYGI
PHSELAKLHQLSMQQQGLAAQMSQQQANSVMSGMDSNSQTSSQELLIPNDLIGSIIGRQG
TKINEIRQASGAQIKIGSQLDSTSDRHVTITGTTISINLAQYLITSCLETAKSTAQSSSM
STSADHTMAYTQPSSPSPASSSSAAATLAAMGCPGMSHHNPHAAVPMMGNPYGALSLSSL
LGMQSMKSLQSMPYLALSNPAANAAAAQAQAQAQAQIYTAKISSVNGIGKKPERQKFAPY
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcttcctgtgtctcattcccacatcaacatgaactgtgagccggactttgaagaa
gggggcatgaatgtcaccctcacactacgactcctcatgcatggaaaggaagtcggcagc
atcatcggaaagaaaggagagacagtgaagagaatacgagaagagagcagtgcccgtatc
aacatctcagagggctcgtgtccagaaaggatcatcaccataacaggacctacagactgt
gtcttcagagccttcactttgatcacactcaaactggaagaggaccttacaactctggta
gccaatggcacggtcaccagcaagccccccgtcaccctgcgattggtcattcctgccagc
caatgcggctctctcatcgggaagggcggctccaagatcaaggagatcagagagaccacc
ggggcacaagtacaggtagctggggaccttctgcccaactccacagagagaggagtgacg
atatctgggacccaagacgctatcatccagtgtgtcaaactgatatgcactgtaattctt
gagtcacctccgaaaggggccactattccataccgacccagcccctccccaggaacagtc
atgatggccgggaaccaggtgtttgagacgtctgactacggatcacaccccctcttccat
atggcccagggagggctggatttacaacaagtgtacgctgtacagaaccaatatggcatt
ccacattcagagttggccaagcttcaccagttgtctatgcagcagcaaggcctggccgcc
cagatgagccaacagcaagccaactctgtcatgtctggaatggactccaattcccagacc
tcatcacaggaactgctcattcctaatgacctcatcggctccatcatcgggcgtcagggc
accaagatcaatgagatccgccaggcgtcaggggctcagataaagattggtagccagctg
gacagcaccagtgatagacatgtcaccatcacagggaccaccatctctatcaacctggcc
caatacctcatcacctcctgtttagagaccgccaaatccaccgcccagtcttcctccatg
tcgacctctgctgaccacaccatggcctacacccaaccgtcctccccctcccccgcctcc
tcctcctcagccgctgccaccctggctgcaatgggctgccccggcatgtcccaccacaac
ccccacgctgcagtccccatgatgggcaacccctatggggccctctccctctccagcctc
ctcggaatgcaatccatgaaatccctccaatccatgccctacctggctttatccaaccct
gccgccaacgcagcagccgctcaggctcaggctcaggctcaggctcagatctacacggcg
aagatctcttccgtcaacgggatcgggaagaaaccagagagacagaagtttgcgccgtac
tga
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