Coregonus clupeaformis (lake whitefish): 121574733
Help
Entry
121574733 CDS
T08357
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121574733
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cclu03021
]
121574733
03036 Chromosome and associated proteins [BR:
cclu03036
]
121574733
Transcription machinery [BR:
cclu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
121574733
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
121574733
PBAF complex
121574733
GBAF(ncBAF) complex
121574733
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
121574733
NCBI-ProteinID:
XP_045078747
LinkDB
All DBs
Position
10:2036048..2063572
Genome browser
AA seq
514 aa
AA seq
DB search
MAARGSFQSAPTGGGGGGMGPGPPVQGGGPGMGPGTPGGRMGPSSGAQNHLYRSPMPGPG
YPRPGGMPPSSRMTPQGPPMGPPGYGSSPVSRPGMPSVMDPSRKRPAPQQIQQVQQQRNQ
HTKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRK
LRIFISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDTAVSKYEATKQKRKFSSFFKSLV
IELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFKLDPRL
ARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSEIPQRL
HALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAGLD
NKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVANPEEERRAEF
YFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcggccagaggtagttttcaatcagctccaaccggaggtggtggcgggggaatggga
cccggacccccggtgcagggtggaggaccaggcatgggacctggaactcctggaggaagg
atgggaccctcatcgggcgcacagaaccacctctatcgctctccgatgcctgggcctgga
tacccgagaccaggtgggatgcccccatccagccgtatgaccccccagggcccgcccatg
gggcctccaggctacggctccagccctgtgtcccgaccagggatgcccagtgtcatggac
ccctcccgtaaaaggcctgccccccagcagatccagcaggtccaacagcagcgcaaccaa
cataccaagaagaagaagatggcggataagattctacctcagaggatccgggagctggtg
ccagagtctcaggcctacatggacctgctggcgtttgagaggaagctggaccagaccatc
atgaggaaacgccttgacatccaggaggcactcaagagacccatcaagcaaaagcgaaag
cttcgtatcttcatatccaacactttcaaccccgccaagcccgacgcagaagatggggag
ggtactgttgcatcatgggagctgcgtgtcgaagggcgcctgcttgaagatactgctgtg
tccaagtatgaagccaccaagcagaagagaaagttctcttccttcttcaagtctctggtc
atcgagttggacaaggacctatatgggcctgacaatcacctggtcgagtggcacaggact
gcgaccactcaggagacggatgggttccaggtgaagagaccaggtgatgtgggggtacgc
tgcactgtcctgctgatgctggactaccagccccctcagttcaagctagaccctcgtctg
gcccgtatgttggggattcacactcagaccaggccagtcatcatccaggccctctggcag
tacgttaagacccacaagctacaggacccacacgagagagagttcatcaactgtgacaag
tacctgcagcagatctttgagacccagcgtatgaagttctctgagatcccccagcgtctt
catgctctcttgatgcctccagaacccatcatcatcaaccatgtcatcagcgtggatccc
aacgaccagaagaagacggcctgctatgacatcgacgtggaggtggacgacactctaaag
acccagatgaactccttcctcctgtccaccgccagccagcaggagatagctggcctggac
aacaagatccatgagaccatagagacgatcaaccagctgaagacccagagagagttcatg
ttgagcttcgccagagacccccagggcttcatcaacgactggctgcagtcacagtgccgg
gacctcaagactatgactgatgtggttgcgaacccagaagaggagaggagagcagagttc
tattttcaaccctgggcccaggaggcagtgtgtcggtacttctactccaaggtccaacag
aggcgacaggagctggaacaagccctgggaatcagaaatacctag
DBGET
integrated database retrieval system
