KEGG   Coregonus clupeaformis (lake whitefish): 121574739
Entry
121574739         CDS       T08357                                 
Name
(RefSeq) integrin alpha-7-like isoform X1
  KO
K06583  integrin alpha 7
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04510  Focal adhesion
cclu04512  ECM-receptor interaction
cclu04810  Regulation of actin cytoskeleton
cclu04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    121574739
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    121574739
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    121574739
   04810 Regulation of actin cytoskeleton
    121574739
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cclu04147]
    121574739
   04515 Cell adhesion molecules [BR:cclu04515]
    121574739
Exosome [BR:cclu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   121574739
Cell adhesion molecules [BR:cclu04515]
 Integrins
  Integrin alpha subunits
   121574739
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_1 Integrin_A_Ig_2 FG-GAP FG-GAP_3
Other DBs
NCBI-GeneID: 121574739
NCBI-ProteinID: XP_045078742
LinkDB
Position
10:complement(1411692..1493399)
AA seq 1116 aa
MAPHVRYGVSLSHRLPLLPLLLSLTVAGFNLDTSMTLTKEGEKGSFFGFSLALHQQLTPE
PHSWILVGAPRARGLGLMRRQRPGALYRCPIKGEEFDCERVDIDGDVNLESESKDNQWLG
VTVKSQGIGGKVVTCAHLYELRHRVGLPSETRDPIGRCYVLSEDLTERDDLDGGEWKFCE
GRPQGHEQFGFCQQGMSAAFTPDNQYIMFGAPGTYNWKGEMRVQLLNQTLLDLGFYDDGP
YEVADEKQLNAQLIPVPSHSYLGFSVDSAKGIMSRGELTFVAGAPRANHTGAVVLLRKDN
MYRLVPQHILWGEELASSFGYSVTTADLNSDGWTDLIVGAPNYFDRKTEIGGAVYVFLNP
FGNWEYARPIRLNGTYDSMFGLTVNNVGDLDRDGYDDIAVGAPFDGDGKVFIYRGSSSGI
HTKPAQILDGVDEGVKRFGYSISGGLDIDGNLYPDLAVGSLGDKMVLYRSHPVIHVTRDV
FVEPQQYIDLEQHNCKGRDGVCVEVKVCFTFTAYPESYSPDITLVLLFEADTERRKLGLP
HRVSFLGRSAQEAEYTHTDEVELNGQRHPACRKATFQLQENIRDKLRPISLTITHTIKPP
VFSSDTHPEERHTLPPVLSVASSNTLHSEVNFLREGCGDDKICQSNLKFTYQFGTRPITS
DLFTPLPKDDEEVAVFSLTDQRSVVLEVTVTNMPSDPLHPEEDGDDAHAAQLVVTLPDTL
SYSGFRGQQVVCQANQNGSQAECELGNPLKRDATLKFYIILSTSAITIETTELTVNLLLA
TISEQPDLAPVTAVAKVIIELPLAVSGLARPHQLFFSGAVKGESAMETLDDVGSALEFEF
TVTNTGPSLQTLGSAFLNIMWPHELSNGKWLLYPTALHFQGHPETHCTPHTSLNPRKFSH
SSPSEDQPKATAKRKGRSHPEEEGHVMNKGSLGRTTPAVAASERRKSLKLDCVLGSARCV
LFQCPLHSFSGSAVLKIQGRLWNSTFLEEFPSVSALELLVRANITVKSSIKHLVLRDSAA
QVPVMIYPEIGLTAQYWIPWWWILTAILAGILVLALLVCILWKCGFFRRVQYEDKVPQYH
AVKIPRQDRPQFHQSQQKAGILQKKEWATHWSDGTS
NT seq 3351 nt   +upstreamnt  +downstreamnt
atggcaccacatgtgagatatggagtctctctgtcacatcgtcttcctctccttcctctt
cttctctccctgacggtcgcagggtttaacctggacactagcatgactctgaccaaggag
ggggagaaagggagcttttttggattttctctagcacttcaccagcaacttaccccagaa
ccacacagttggatactggtgggggctccccgggccagaggactgggcctcatgcggaga
cagcgtcctggcgccctgtaccgctgtccgatcaaaggcgaggagtttgactgcgagcga
gtggacatcgatggagatgtaaaccttgagagtgagagcaaggacaaccagtggctagga
gtaacagtcaagagccaggggattggaggaaaggtggtgacctgtgcccacctgtatgag
cttcgtcaccgtgtgggcctgccgtcggagacgcgggaccccatcgggcgttgctacgtc
ctgagtgaggacctgacagaaagggacgacctggatggaggggagtggaagttctgtgag
gggcgaccccagggacacgaacagtttggcttctgtcagcagggcatgtctgccgccttc
acacctgacaaccaatatatcatgttcggagctccaggaacgtacaactggaaaggagag
atgcgtgtccagctgctaaaccagactctgttggatcttggtttctatgacgacgggcct
tatgaggtggcggatgagaaacagctgaacgctcagctgatcccagttccctcacatagt
tacctgggtttctcggtggactctgctaagggcataatgagccgtggggagctgaccttt
gtggcgggggctccgagagccaatcacacgggagcggtggtgctgctgcgtaaagacaac
atgtaccgcctggtgccacagcacatcctgtggggagaggagctggcttcttcctttggc
tactctgtgactacggctgatctcaacagtgatggctggacagacctgatagtgggagct
cctaactactttgacaggaagacagagatcggaggtgctgtatacgtcttcctgaaccca
ttcggtaactgggagtatgctcggccaatcaggctcaacggaacctatgactccatgttt
gggctgaccgtcaacaatgtaggagacctggaccgggacggatatgatgacatcgctgtg
ggggctccgttcgacggagatggcaaagtgttcatctaccgaggctcgtcttcaggcatc
cacaccaagcctgcacagatcctggacggggtggacgagggggtgaaaaggttcggctac
tccatctcaggaggcctggatatcgatgggaacctgtaccctgacctggcagtaggctct
ctcggtgataagatggttctgtacaggtctcacccggtcattcatgtgacccgggacgta
ttcgttgaacctcagcagtatattgacttggagcaacacaactgcaaggggagagatggg
gtgtgtgtggaggtcaaagtttgcttcacctttactgcatatccagagtcttactcacca
gacatcactctggtcctactcttcgaggctgacaccgagcgcaggaagctgggcctgccc
caccgtgttagcttcctgggtcggagtgcacaggaggcggagtacacacacactgatgag
gtggagctgaatggtcaacgtcatcccgcctgccggaaagccaccttccaactacaagag
aatatccgtgacaagctgcgtcccatctccctgaccatcacccacaccatcaaaccccct
gtgttctcctcagacactcacccagaggaacgacacacgctacctcctgtactgagtgtt
gccagctccaacaccctgcactctgaggtgaatttcctgagggaaggctgtggtgatgat
aagatctgtcagagcaacctgaagttcacctaccagtttggaacccgacctataacctct
gacctcttcacccctctgccaaaagatgatgaggaggtggcagtgttctctctgactgac
cagaggtctgtggtgttggaggtgaccgtcaccaacatgccctctgaccctctgcacccc
gaggaggacggtgacgacgcccacgccgcccagctagtggtcaccctgccagacaccctg
tcatactctggcttcaggggacaacaggtggtgtgtcaggccaatcagaatggctctcag
gcagagtgcgagctgggaaaccccctgaagagagatgctacactgaagttctacatcatc
ctcagcacctctgctatcaccatagagaccacggaactcactgtcaacctcctgctggct
actatcagtgagcagccagacctggccccagtcacagccgtggccaaagtcatcatagag
ctccctctggctgtcagtgggctggcccggccacaccagctgttcttcagtggagctgtg
aagggggagagcgctatggagacactggacgacgtgggcagcgctctggagtttgagttt
acggtgaccaacaccgggccgtccctgcagactctaggctcagccttcctcaacataatg
tggcctcatgagctgtccaatgggaagtggctcctgtaccccaccgctcttcacttccag
ggccatccagaaacacactgtaccccccacacctccctcaacccacgcaagttctcccac
agctctccttctgaagaccagccaaaggctacagccaagaggaaggggcggtcccacccg
gaagaggaggggcatgtgatgaacaagggcagtctgggtaggaccacgcccgctgtggcc
gcctccgagagacgcaagtcactcaaactggactgtgtgctgggttcagcgcgctgcgtc
ctcttccagtgtcctctccacagcttctctggctcggctgtcctcaagatccagggacgt
ttgtggaacagcactttcctggaggagttcccatcagtcagtgctctggagctgctggtt
agagccaacatcacagtcaagtccagcatcaaacacctggtgctgagggattctgccgca
caggtcccagtgatgatttacccagagattggtctgactgcccagtactggatcccctgg
tggtggatcctcacagccatcctggctggtatcctggtgctggccctgctggtctgcatc
ctctggaagtgtggtttcttccgtcgggtccagtatgaagacaaagtgcctcagtaccat
gcggtgaagattccccgtcaggaccgtccccagttccatcagagccagcagaaggcaggg
atcctccagaagaaagagtgggctacacactggagcgatggaacctcctga

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