Coregonus clupeaformis (lake whitefish): 121574743
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Entry
121574743 CDS
T08357
Symbol
nckap1l
Name
(RefSeq) nck-associated protein 1-like isoform X2
KO
K05750
NCK-associated protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04810
Regulation of actin cytoskeleton
cclu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
121574743 (nckap1l)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121574743 (nckap1l)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Nckap1
Motif
Other DBs
NCBI-GeneID:
121574743
NCBI-ProteinID:
XP_041743232
LinkDB
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Position
10:1149431..1197232
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AA seq
1128 aa
AA seq
DB search
MSMAMAYQQKLAEKLTILNDRGRGVLLRMNYIKKTCSDPKLRPQYLTDKTMEASVKYINK
KFPNIDFRGNSQHLTGIQRQKTEVMTTMSSYYDSFIDVMEFRDHVYELLNTIDACQCFFN
IAVNFDFTKNYLELIITYTSVIFMLSRIEDKKVLVAMYNCAHEMSNGSSDPAYPRLSQMF
MEYEQPIKKLTEEFGPHTKAVTEALLSLQMLYPRRNLPAEQWRSAQLLSLLSTPAAMLDP
ACCDTMTCEYLSLEVMERWILLGYLLCHSSLNTNQSSQELWKMALRSGLYLTIIRDETIN
IHKVTEECFEGLKGYSKRFADIKECREYAIVNSGAMHRERRGFLRNALKELVKVLEDEPG
LLGPKVLFVFMALSFSRDEVLWLVRHSENIPKTKTPEDYVDSQMAELLFYMERLRTLVTK
YSRVVQRYHIQYLAQFDALLLNDTIQNMYVCPEEESVLMTSFVSTLSALTIKQVENGEEF
DFRALRLDWLRLQTYTSVSKAPLSLKDYPDLAKVMNMTQFHTKMLDNVEEMLHETSDLSI
LCFYPRVFEKMFSQSSEEVSMQRYLMSFPLACSHFNQTLHQLCPEETEAVEKRSLRLCVT
FLEEIARQTSSVILEICAEQCNLNDQLLPKHCGQTISAARNKKQKKQTPKKGEVQREKPG
AESQRKDRAIVTNMDKLHLTLTELCSSFSGSSDFTVFNHIVTPTEFLISQLEARLTKIIV
RMAHYNQTTQEVGRPSDLLAGIQAYTASLHTLSRYLSLDVTRLVKNVLLQQTQPLDSYGG
QTITTLYTNWYLEGLLRQASSNLIVHCPTMHCFVNQTIENEQSFRAEEYSDISEMQALAE
LIGPYGLKFLSENLMWHITSQVGELKKLVIENMDVLVQMRANFDKPEAMANLQKRLPAGE
NVLKRMTIIGVILSFRTMAQDTLEDIMQKHCPYLMGPIESLRDLVSPDTDIKVTLTVFEL
ASAAGLTCDIDPALVAAIASMRTDNSSVDEEYKLTCLLLIYIAVSLPTLALDPNSYYSRH
YGGHHNNIHCLATAVNQLSAAMFTAENKNIEQHLKEFLLVASSTLLQLGQNVENRMDSKN
RDSIYLLLHMIVEASPFLSQDMLESCFPYVLLRNAYREVYKTFIITLG
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgtccatggccatggcttaccaacagaagctagctgagaagctcaccatcctcaacgac
agagggagaggggtgctgctacgtatgaactacatcaagaagacatgctcggatcccaag
cttcggccacaatacctgacggacaagaccatggaagcgtctgtcaaatacatcaacaag
aagttccccaacatagacttcaggggaaacagtcagcatctgacaggcatccagagacag
aagactgaggtgatgaccactatgtctagttactatgactccttcatagacgtcatggag
ttcagggatcatgtttatgaactgctgaatacaattgacgcctgccagtgtttcttcaat
attgcggtgaactttgacttcaccaagaactacctggagctgatcatcacctatacgtct
gtaatcttcatgctttcacgcatcgaggacaagaaggtcctggtggccatgtacaactgt
gctcacgagatgtccaacggtagcagtgaccctgcgtatccccgtctgtctcagatgttt
atggagtatgaacagcccattaagaaactcactgaggagttcggccctcacactaaggct
gtgacggaggccctcctgtccctacagatgttgtaccccaggaggaaccttcctgcagaa
caatggcgcagcgctcagcttctcagtctcctcagcacacctgctgccatgctggaccct
gcctgctgcgacaccatgacctgtgagtacttgtccttagaggtgatggagcgctggatc
cttctgggttacctgctgtgtcacagcagtctgaacaccaaccagtcatctcaggagctg
tggaagatggccctccgcagcggcctttatctcactatcatcagggatgagacaatcaac
atccacaaggtcacagaggaatgcttcgaaggcctgaaagggtacagcaagcgtttcgca
gatatcaaagaatgccgggagtatgccatagtcaacagtggagccatgcacagagaaagg
agaggtttcctgaggaatgccttgaaggagctggtcaaagtcctggaggatgaacctgga
ctcctgggacccaaggtgttgtttgtcttcatggctctgtcattttcccgtgacgaggtt
ctgtggctcgtcagacattctgagaatattcccaagaccaagaccccggaggactacgta
gactcgcagatggctgagctcctgttctacatggagaggttgaggaccctggtgactaag
tacagccgtgtggttcaacgctaccacatccagtacctggcccagtttgatgccctgctc
ctcaacgacaccatacagaatatgtatgtctgtccagaagaggaatcagtcctgatgaca
tcgtttgtctcaaccctgtctgcactgactatcaagcaagtggaaaacggagaggagttt
gacttcagggctctgagactggactggttaagattacagacctacaccagcgtgtccaag
gcccctctctccctcaaggactacccagacctggctaaagtgatgaacatgacccaattc
cacaccaagatgttggacaacgtggaggagatgcttcacgaaacctcagatctctccatc
ctctgcttctacccgcgggtgtttgagaagatgttctctcagagcagtgaggaggtttct
atgcaacgttacctcatgtctttccctctggcctgctcccacttcaaccagactctccac
cagctctgtccagaagagacggaggctgttgagaagaggagcctgcgtctgtgtgtgacc
ttcctggaggagattgccagacagaccagctccgtcatcttagagatctgtgccgaacag
tgcaacctcaatgaccagttgttgcccaaacactgtggccagaccataagtgcagcccgc
aataagaagcagaagaaacagacgccgaagaaaggagaggtgcagagagagaaacctgga
gcagagagccagaggaaggaccgtgccatcgtcaccaatatggacaagctgcatctgact
ctgactgaactgtgctcctccttcagtgggagcagtgacttcacagtgttcaaccacatc
gtcactcctacagagttcctcatatctcagttggaggcacgcctcaccaagatcatcgtg
agaatggcccattacaaccagaccacccaggaagtaggacgtccgtctgaccttctggcc
ggaattcaggcctacacggccagcctgcacaccctgtcacgctacctcagtctagatgtc
actaggctggtcaagaatgtcctactgcagcagacacagccgctggactcatacggagga
cagaccatcaccacgctgtataccaactggtacctagaggggcttctgcgtcaggccagc
agcaacctgatcgtccactgccccacaatgcactgctttgtcaaccagaccatcgagaac
gagcagagtttcagagcagaggagtactctgacatctcagagatgcaggcccttgccgag
ctgattggtccgtacggtctcaagttcctcagtgagaacctgatgtggcacatcacctca
caagtcggagaactcaagaaactggtgatagagaacatggatgtgctagttcagatgaga
gctaactttgacaaacccgaggccatggctaacctccagaagagactgcctgcgggagag
aacgtcctgaagaggatgaccatcatcggagtgatcctgtcctttaggaccatggcacag
gacacactggaagacatcatgcagaagcattgcccctacctgatggggcccattgagagc
ctgagggacctggtctcccctgacacagacatcaaggtaaccctaacggtgtttgagctg
gcgtctgcggcaggtctgacttgtgacatcgaccctgccctagtggcagccatcgctagt
atgcgtacagataactcgtctgttgatgaggagtacaaactgacctgcctcctcctgatt
tacatcgcggtgtctctgcccaccctggctctggaccctaactcttactacagcagacat
tatggagggcaccacaacaacatccactgtctggccacggccgtcaatcagctgtctgca
gccatgttcaccgccgagaacaagaacatagaacagcacctcaaggagttcctcctggtg
gcgtcatccactctgctccagctgggtcagaatgtagagaatagaatggacagcaagaac
agagactccatctaccttctcctgcacatgatcgtggaggcgtctccgttcctgagccag
gacatgttggagagctgtttcccttatgtcctgctgaggaacgcctacagagaggtctac
aagaccttcatcattacgctgggctaa
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