Coregonus clupeaformis (lake whitefish): 121574782
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Entry
121574782 CDS
T08357
Symbol
shmt2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00260
Glycine, serine and threonine metabolism
cclu00630
Glyoxylate and dicarboxylate metabolism
cclu00670
One carbon pool by folate
cclu01100
Metabolic pathways
cclu01200
Carbon metabolism
cclu01230
Biosynthesis of amino acids
cclu01240
Biosynthesis of cofactors
cclu04981
Folate transport and metabolism
Module
cclu_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
121574782 (shmt2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
121574782 (shmt2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
121574782 (shmt2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
121574782 (shmt2)
Enzymes [BR:
cclu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
121574782 (shmt2)
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Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
121574782
NCBI-ProteinID:
XP_041743284
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Position
10:complement(5394907..5466035)
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AA seq
503 aa
AA seq
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MLSLTLRQIARPLCQRAPVALSSVGARRGQHAATRSVEQEAPWTGQDSLAQDDPEMWDLL
RKEKDRQCRGLELIASENFCSRAALEAQGSCLNNKYSEGYPGRRYYGGAEVVDQIELLCQ
KRALEAFDLDPALWGVNVQPYSGSPANFAAYTAVLNPHDRIMGLDLPDGGHLTHGYMSDT
KRISATSIYFESMPYKLNPATGLIDYDQLEMTARLFRPKLIIAGTSAYARLIDYARIKKL
CTEVKAYLLADMAHISGLVAAKAVPSPFKYADMVTSTTHKSLRGARAGLIFYRKGVRSVD
KKGKEIHYDLEDRINFAVFPSLQGGPHNHAIAGVAVALKQAQTPMFREYIGQVMRNSKAM
AEALLGKGYTLVSGGTENHLVLVDLRPKGIDGARAERVLELVSITANKNTCPGDKSALAP
GGLRLGAPALTSRQFKETDFVKVVEFMDEGFKIALDVKKKTGKLADFKNFLLEDPETVAR
MAELRKRVEAFARPFPMPGFEDH
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcattgacgttgaggcaaattgcacggccgttgtgccagcgtgccccggtggcc
ctgagcagcgtgggggcgaggaggggtcagcatgcggctacccgtagtgtggagcaggag
gccccatggacagggcaggacagtctggcccaggatgacccagagatgtgggacctgctg
cggaaagagaaggacaggcagtgtcggggactggagctcatcgcctctgagaacttctgc
agtcgggctgccctggaggcccaaggatcctgcctcaataacaagtactcagagggctac
ccaggcaggaggtattatggtggagctgaggtggtggaccagatagagttgttgtgccag
aagagagccttggaggcctttgacctggaccctgccctgtggggggtgaacgtccagccc
tactctggctctcccgcaaactttgctgcctacaccgccgtcctcaaccctcatgaccgc
atcatgggcctagacctgcctgacggtggacatctgacccatggttacatgtctgacacc
aagaggatctctgctacctccatctattttgaatccatgccctacaagctcaatcctgcc
acaggactcatcgactatgaccagctggagatgactgcccgtctcttccggcccaagttg
atcattgcaggcaccagcgcctacgctcgcctcattgactacgctcgcatcaagaagttg
tgtacggaggtgaaggcctacctgctggctgacatggcccacatcagtggcctggtggct
gcgaaggctgtcccctctccgttcaagtacgctgacatggtcacctccacaacacacaag
tccctccgaggagccagggctggtctgatcttctaccgtaagggcgtgcgttctgtggac
aagaaggggaaggagatccattatgaccttgaggacaggatcaacttcgctgtgttcccc
tctctgcaggggggaccccacaaccacgccatcgctggggtggccgtcgcactcaaacag
gcacagacgccgatgttcagagaatacatcggccaggtgatgcggaactccaaggccatg
gctgaagccctactgggcaaaggatacaccctggtgtcaggggggacggagaaccacttg
gtgctggtggacctgaggcctaagggcatcgacggagccagagcagagagggttttagag
ctggtgtccatcacagccaacaagaacacctgccctggggacaagagtgctctggcgcct
gggggcctcaggctaggtgccccggcgctgacctccagacagttcaaggagacagacttt
gtcaaggtggtggagtttatggatgaaggcttcaagatcgccctggacgtcaagaagaag
actgggaaactagcagactttaagaacttcttgttggaggatccagagacagtggcccgc
atggcagagctgaggaaacgagtggaggccttcgcacggcccttccccatgcccggcttt
gaggatcactag
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