Coregonus clupeaformis (lake whitefish): 121574816
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Entry
121574816 CDS
T08357
Name
(RefSeq) contactin-3-like
KO
K06761
contactin 3/4/5/6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cclu04515
]
121574816
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cclu00537
]
121574816
Cell adhesion molecules [BR:
cclu04515
]
Immunoglobulin superfamily
Contactins
121574816
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cclu00537
]
Others
121574816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Ig_C17orf99
C2-set_2
Pur_ac_phosph_N
C2-set_3
Pox_C7_F8A
Motif
Other DBs
NCBI-GeneID:
121574816
NCBI-ProteinID:
XP_041743345
LinkDB
All DBs
Position
10:complement(34050274..34102657)
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AA seq
1041 aa
AA seq
DB search
MSRICPWQLKMMLLWKRLLLLSIIGCLAARAQDVLFQGPKWRTEPSDLILPNNSPDQEAT
ITCEAEGNPSPQYRWSLNGTLIDLGSDYRRHMSGGNLIINSLDRDEDTGIYQCTAFNTWG
TILSRRATLQFAYLDNFKSQMARSAVNVREGQGVVLLCGPPMHSGELTFAWIFNEYPYFV
QQDSRRFISQETGSLYIAKVEPSDVGNYTCVVNNSITKGKVLSSPTPLVLRNDGAMGEYE
PKIEVHFPDTVPAAKGSTVKLECFALGNPVPEISWRRTSGVPFPSKVKMKNSNAVLEIPH
FQQEDTGTYECVAENSRGKNTARGRIAFQAKPHWLQTMIDGALSIEENLFWECKANGKPK
PSYSWLRNGDNLMAEGRVQIENGALSIAALNLSDAGMYQCVAENKHGIIYSSAELMVLAS
PPSFSKNPLKALLKARSGSEVALECKPQASPRAISLWKKGNEILQRNERITLLPNGTLKI
VNATRRDAGSYTCIAKNQFGTASTTGRLLITEPTRITQRPANMEIIVGESIVLPCQIASD
PALDVSFSWAFNGQLIDFHGDADHFDRVGGSISGDLMIRNIQLNHGGKYVCVIDTDVENL
SASAILVVKGPPGPPDTVAVEEITDSTAQLSWSPGRDNGSPITGYIIQARTPFTVGWQAV
DTVPEVINGNTLTATVVGLNAWVEYEFRVVARNSVGMGEPSPASAKTRTEDTMPDTAPTD
VGGGGGTKSELVITWEPVPEELQNGEGFGYIIAFRPLGAVTWTRAVISTPGVARYIFRND
TIPPFSPFNVKVGAYNNRGEGPFSSIATVFSAEEVPIEAPKRVWGRSVSAAQIEVIWEAL
PITPERVLGYEVVYWEDDTKPDTVGKVRISGNYSAVNVTGLNANTQYYLAVCAFNTAGTG
PQSIPINATTKKPAPGQPPLNVEWTMIGSLLTLHWGPVIAMETEAEVIGYRVLLRRHRYN
DVNSIVTNKTRMELTLSPNDNYLIQIKALSEGGEGVGSEPIHIHRLSMGARGSGASSLNP
LSLSHLSAFLISALLLLNSSW
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtatttgcccttggcaactgaagatgatgttactatggaaacgacttctgctg
ctatcaatcattggttgccttgccgctcgtgcacaagatgtcctattccaagggccaaaa
tggaggacagagcccagtgacctcattctccccaacaactcccctgaccaggaagccacc
attacatgtgaggcagaggggaacccctccccacagtacagatggtcgcttaacggaaca
ctcattgatctggggagtgactaccggcgtcacatgtctggaggcaacctgatcattaac
agtctggacagggatgaagacacggggatataccagtgcactgccttcaacacatggggg
actatcctcagccgcagagccactctgcaatttgcatacctagataacttcaagtcccaa
atggcacggagtgctgtcaatgtccgagagggccaaggagtggtgttgttatgtggacca
cccatgcattctggagagctgacatttgcgtggatcttcaatgagtacccctactttgtc
cagcaagatagtcgtcgattcatctcccaggagacaggaagtctgtacatcgcaaaagtg
gagccttctgatgtgggcaactacacctgtgtggtcaacaatagcatcactaagggcaaa
gtcctcagctctcctacaccgctggtcctgaggaatgacggagcaatgggtgaatacgaa
cccaaaatagaagttcatttccctgacactgttccagctgcaaagggatccacggtaaaa
ctagaatgcttcgcactgggaaacccagtcccagaaataagttggaggagaaccagcggc
gtcccatttcccagtaaggtgaagatgaagaactccaacgctgtccttgaaattccacat
ttccagcaggaagacacagggacgtatgagtgcgtggcagaaaatagcagaggaaaaaac
actgcacgaggtcgtatcgccttccaggcgaaaccccattggctccagacaatgatcgac
ggcgccctgtccattgaggagaacctgttctgggagtgtaaggcaaacgggaagcccaag
ccctcctacagttggctgaggaatggagacaacctaatggcagagggccgggtgcaaatc
gaaaacggggctctctccatagcagcattaaacctgtcagatgccgggatgtatcagtgt
gtggctgaaaacaaacatggcattatttattccagcgctgagctaatggtgttagcatca
cctcccagtttctccaagaatccactgaaggccctgctgaaagctcgctcaggcagtgaa
gtggctctagagtgcaagccccaagcctcgccccgggcaattagcttgtggaagaaaggc
aatgagatcttgcagagaaacgagaggattactctgcttcccaacgggacactgaagatt
gtcaacgcaaccaggagggatgcggggagctacacatgcatcgctaagaatcaatttggg
actgcgagcaccactggaagactccttatcacagagcccaccagaatcacccagaggcct
gctaacatggagatcattgttggcgagagtatcgtgctgccctgccagattgccagcgat
ccagccttggatgtgtctttctcctgggccttcaacgggcagctcatagacttccatggg
gacgccgaccatttcgacagagtaggagggagcatttcaggagatctgatgattcgtaac
atccagctgaatcacggggggaaatatgtctgtgttatcgacaccgacgtggagaacttg
tccgcttcggccatcttggttgtgaaaggtccccccgggccaccggacacagtagcggtg
gaggagatcacagatagcacggcccagctctcctggagccccggcagggacaacggcagc
cctatcaccggctacatcatccaggcccggacccccttcactgtgggctggcaggctgtg
gacacagttcctgaggtgatcaatggcaacacactgacagccactgtggtgggcctgaac
gcctgggtggagtatgagttcagggtggtggcccgcaacagtgtgggcatgggagagccc
agtccagcctcagccaagaccaggacagaggataccatgcctgatacagctcccactgat
gttggaggcggaggaggcacaaaatctgaattagtgataacttgggagcccgtgcctgag
gaactgcagaatggagagggtttcggttatatcatcgccttccggccgctgggtgccgtc
acctggacacgagcggtcatctccacgcccggggtggcccgatacatcttccgcaacgac
actatcccacctttctcgccgttcaatgtgaaggttggggcgtacaacaaccgtggggag
gggcctttcagttccatagccacagtgttctcagcagaggaagtacccattgaggctcct
aagagggtttggggcaggagtgtatctgcagctcaaattgaagtgatctgggaagccctc
cccatcacccctgaaagagtgcttggttatgaggtggtgtactgggaagatgacaccaag
cctgacacagtaggcaaagtgagaatctctggaaactactcagcggtcaatgtgactgga
ctgaacgctaacacacagtattacctagctgtgtgcgcttttaacactgcagggacaggg
ccacagtctatacccatcaacgccaccaccaagaagccagcaccaggccagcctcctttg
aatgtagagtggaccatgattggctctctgctcactctacactggggtcctgtgatagcc
atggagacagaggcagaggtcatcggatatcgtgtgctgttgagaagacaccggtacaat
gacgtaaacagcatcgtaacaaacaaaaccaggatggaactgacgctgtctcccaacgac
aactacctgatccagatcaaggccctgagtgagggcggtgaaggtgtgggcagcgaaccc
atccacatccacagattaagcatgggtgcacggggctcgggagcgtctagtctcaatccg
ctatcgctgtctcatctctctgcattcctcatcagcgctctcctcctcctcaactcctcc
tggtga
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