KEGG   Coregonus clupeaformis (lake whitefish): 121574816
Entry
121574816         CDS       T08357                                 
Name
(RefSeq) contactin-3-like
  KO
K06761  contactin 3/4/5/6
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:cclu04515]
    121574816
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:cclu00537]
    121574816
Cell adhesion molecules [BR:cclu04515]
 Immunoglobulin superfamily
  Contactins
   121574816
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:cclu00537]
 Others
  121574816
SSDB
Motif
Pfam: Ig_3 I-set ig Ig_2 fn3 V-set Ig_DSCAM-DSCAML_C Ig_5 Ig_C17orf99 C2-set_2 Pur_ac_phosph_N C2-set_3 Pox_C7_F8A
Other DBs
NCBI-GeneID: 121574816
NCBI-ProteinID: XP_041743345
LinkDB
Position
10:complement(34050274..34102657)
AA seq 1041 aa
MSRICPWQLKMMLLWKRLLLLSIIGCLAARAQDVLFQGPKWRTEPSDLILPNNSPDQEAT
ITCEAEGNPSPQYRWSLNGTLIDLGSDYRRHMSGGNLIINSLDRDEDTGIYQCTAFNTWG
TILSRRATLQFAYLDNFKSQMARSAVNVREGQGVVLLCGPPMHSGELTFAWIFNEYPYFV
QQDSRRFISQETGSLYIAKVEPSDVGNYTCVVNNSITKGKVLSSPTPLVLRNDGAMGEYE
PKIEVHFPDTVPAAKGSTVKLECFALGNPVPEISWRRTSGVPFPSKVKMKNSNAVLEIPH
FQQEDTGTYECVAENSRGKNTARGRIAFQAKPHWLQTMIDGALSIEENLFWECKANGKPK
PSYSWLRNGDNLMAEGRVQIENGALSIAALNLSDAGMYQCVAENKHGIIYSSAELMVLAS
PPSFSKNPLKALLKARSGSEVALECKPQASPRAISLWKKGNEILQRNERITLLPNGTLKI
VNATRRDAGSYTCIAKNQFGTASTTGRLLITEPTRITQRPANMEIIVGESIVLPCQIASD
PALDVSFSWAFNGQLIDFHGDADHFDRVGGSISGDLMIRNIQLNHGGKYVCVIDTDVENL
SASAILVVKGPPGPPDTVAVEEITDSTAQLSWSPGRDNGSPITGYIIQARTPFTVGWQAV
DTVPEVINGNTLTATVVGLNAWVEYEFRVVARNSVGMGEPSPASAKTRTEDTMPDTAPTD
VGGGGGTKSELVITWEPVPEELQNGEGFGYIIAFRPLGAVTWTRAVISTPGVARYIFRND
TIPPFSPFNVKVGAYNNRGEGPFSSIATVFSAEEVPIEAPKRVWGRSVSAAQIEVIWEAL
PITPERVLGYEVVYWEDDTKPDTVGKVRISGNYSAVNVTGLNANTQYYLAVCAFNTAGTG
PQSIPINATTKKPAPGQPPLNVEWTMIGSLLTLHWGPVIAMETEAEVIGYRVLLRRHRYN
DVNSIVTNKTRMELTLSPNDNYLIQIKALSEGGEGVGSEPIHIHRLSMGARGSGASSLNP
LSLSHLSAFLISALLLLNSSW
NT seq 3126 nt   +upstreamnt  +downstreamnt
atgagtcgtatttgcccttggcaactgaagatgatgttactatggaaacgacttctgctg
ctatcaatcattggttgccttgccgctcgtgcacaagatgtcctattccaagggccaaaa
tggaggacagagcccagtgacctcattctccccaacaactcccctgaccaggaagccacc
attacatgtgaggcagaggggaacccctccccacagtacagatggtcgcttaacggaaca
ctcattgatctggggagtgactaccggcgtcacatgtctggaggcaacctgatcattaac
agtctggacagggatgaagacacggggatataccagtgcactgccttcaacacatggggg
actatcctcagccgcagagccactctgcaatttgcatacctagataacttcaagtcccaa
atggcacggagtgctgtcaatgtccgagagggccaaggagtggtgttgttatgtggacca
cccatgcattctggagagctgacatttgcgtggatcttcaatgagtacccctactttgtc
cagcaagatagtcgtcgattcatctcccaggagacaggaagtctgtacatcgcaaaagtg
gagccttctgatgtgggcaactacacctgtgtggtcaacaatagcatcactaagggcaaa
gtcctcagctctcctacaccgctggtcctgaggaatgacggagcaatgggtgaatacgaa
cccaaaatagaagttcatttccctgacactgttccagctgcaaagggatccacggtaaaa
ctagaatgcttcgcactgggaaacccagtcccagaaataagttggaggagaaccagcggc
gtcccatttcccagtaaggtgaagatgaagaactccaacgctgtccttgaaattccacat
ttccagcaggaagacacagggacgtatgagtgcgtggcagaaaatagcagaggaaaaaac
actgcacgaggtcgtatcgccttccaggcgaaaccccattggctccagacaatgatcgac
ggcgccctgtccattgaggagaacctgttctgggagtgtaaggcaaacgggaagcccaag
ccctcctacagttggctgaggaatggagacaacctaatggcagagggccgggtgcaaatc
gaaaacggggctctctccatagcagcattaaacctgtcagatgccgggatgtatcagtgt
gtggctgaaaacaaacatggcattatttattccagcgctgagctaatggtgttagcatca
cctcccagtttctccaagaatccactgaaggccctgctgaaagctcgctcaggcagtgaa
gtggctctagagtgcaagccccaagcctcgccccgggcaattagcttgtggaagaaaggc
aatgagatcttgcagagaaacgagaggattactctgcttcccaacgggacactgaagatt
gtcaacgcaaccaggagggatgcggggagctacacatgcatcgctaagaatcaatttggg
actgcgagcaccactggaagactccttatcacagagcccaccagaatcacccagaggcct
gctaacatggagatcattgttggcgagagtatcgtgctgccctgccagattgccagcgat
ccagccttggatgtgtctttctcctgggccttcaacgggcagctcatagacttccatggg
gacgccgaccatttcgacagagtaggagggagcatttcaggagatctgatgattcgtaac
atccagctgaatcacggggggaaatatgtctgtgttatcgacaccgacgtggagaacttg
tccgcttcggccatcttggttgtgaaaggtccccccgggccaccggacacagtagcggtg
gaggagatcacagatagcacggcccagctctcctggagccccggcagggacaacggcagc
cctatcaccggctacatcatccaggcccggacccccttcactgtgggctggcaggctgtg
gacacagttcctgaggtgatcaatggcaacacactgacagccactgtggtgggcctgaac
gcctgggtggagtatgagttcagggtggtggcccgcaacagtgtgggcatgggagagccc
agtccagcctcagccaagaccaggacagaggataccatgcctgatacagctcccactgat
gttggaggcggaggaggcacaaaatctgaattagtgataacttgggagcccgtgcctgag
gaactgcagaatggagagggtttcggttatatcatcgccttccggccgctgggtgccgtc
acctggacacgagcggtcatctccacgcccggggtggcccgatacatcttccgcaacgac
actatcccacctttctcgccgttcaatgtgaaggttggggcgtacaacaaccgtggggag
gggcctttcagttccatagccacagtgttctcagcagaggaagtacccattgaggctcct
aagagggtttggggcaggagtgtatctgcagctcaaattgaagtgatctgggaagccctc
cccatcacccctgaaagagtgcttggttatgaggtggtgtactgggaagatgacaccaag
cctgacacagtaggcaaagtgagaatctctggaaactactcagcggtcaatgtgactgga
ctgaacgctaacacacagtattacctagctgtgtgcgcttttaacactgcagggacaggg
ccacagtctatacccatcaacgccaccaccaagaagccagcaccaggccagcctcctttg
aatgtagagtggaccatgattggctctctgctcactctacactggggtcctgtgatagcc
atggagacagaggcagaggtcatcggatatcgtgtgctgttgagaagacaccggtacaat
gacgtaaacagcatcgtaacaaacaaaaccaggatggaactgacgctgtctcccaacgac
aactacctgatccagatcaaggccctgagtgagggcggtgaaggtgtgggcagcgaaccc
atccacatccacagattaagcatgggtgcacggggctcgggagcgtctagtctcaatccg
ctatcgctgtctcatctctctgcattcctcatcagcgctctcctcctcctcaactcctcc
tggtga

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