KEGG   Coregonus clupeaformis (lake whitefish): 121574819
Entry
121574819         CDS       T08357                                 
Name
(RefSeq) contactin-4-like isoform X1
  KO
K06762  contactin 4
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:cclu04515]
    121574819
Cell adhesion molecules [BR:cclu04515]
 Immunoglobulin superfamily
  Contactins
   121574819
Motif
Pfam: Ig_3 I-set ig Ig_2 fn3 V-set Ig_C17orf99 V-set_CD47 Tissue_fac C2-set Pur_ac_phosph_N C2-set_2
Other DBs
NCBI-GeneID: 121574819
NCBI-ProteinID: XP_041743355
LinkDB
Position
10:34637021..34868669
AA seq 1030 aa
MMMLLWKLLVLQSLMGCLAESSVLQSPVFTKQPGSIVFPVDSQENNRDVVFSCEAQGSPT
PLYRWKLNGTAITPKSGSHYSLSGGNLRISNLNKDQDAGTYQCLASNSFGTIVSREASLT
FAYLENFKTHRRNSVSVREGQGVVLLCGPPSHSGDLTFSWIFNEYPSFVKQDTRRFISQE
TGNLYIAKVEPSDVGNYTCVVTNTVTKTRVQGPPTPLVLRSDGIMGEYEPKIEVQFPEIV
HVAKGLTVKLECFALGNPVPSINWNRVDGIPFSRKVDVRKASGVLEIPYFQQEDTGTYEC
VAENSRGKNTVKGKLSFYAPPHLIEKPEDVQKPIDDSLVWECKATGKPKPSYRWMKNGEN
LESLEERIQVANGALSISQLTLSDIGMYQCVAGNKHGEVYSNAELRVIAVAPDFSQNQLR
SPTMVKEGGDVLIECRPKMSPWGVISWRKGSEALRESHRVSILDNGNLRIQNSTRPDAGL
YTCVARNQFGVASSSGTLMVKEPTIITTAPSTLDVTVGESIVLPCQVTHDPSLKLMFTWF
FNEQLIHFGNHGGYFEKVGGQHSAGDIMIRNIQLRHAGKYTCAVQTKVDSISIAADLVVR
GPPGPPTSIHVEEISDTTASLSWRPGPDNHSPITTYTIQARTPFSLGWQAVTTVPEVVGG
RRLTATVIDLSPWVEYEFRVLASNAIGTGEPSKPSKQARTKETSPKVTPANVSGGGGSRS
ELVITWEPVPEELQNGGGFGYVVAFRPYGATGWMQAAVPSPEASKYVFKNESIQPFSPFQ
VKVGVYNNEGEGPFGPVITIYSAEEEPGRAPTRIRAKSLSASEIELSWKALPWNTSKRRV
LGYELRYWEKREKEEVASVQRTVGNQTSAIIRGVRGSNTYYVTVRAYNTAGAGPPSATVN
VTTKKPPPSQPPVKVMWNTLNSKIILNWEQVKALENESEVTGYKVLYKGNRHSRPSVMET
NTTSVELSLPMDEEYFIQIKPFGEGGEGSSSRQITIPRIPGSNAIGSATKVSTLSALSTI
ALSFTARTSL
NT seq 3093 nt   +upstreamnt  +downstreamnt
atgatgatgttgctatggaaactgctggtgctgcagtcactcatggggtgcctggcagag
agcagtgtcctgcagagcccagtgttcaccaagcagcctggcagcattgtgttccctgtt
gactcccaggagaacaacagagacgtggtgttcagctgtgaggcccagggaagcccaact
cccctttatcggtggaaactgaatggcaccgcaatcactcccaaatcaggctcacactac
agcctgtctggaggcaacctccgaatcagcaatttgaacaaagaccaagatgctggaaca
tatcagtgcctcgcctccaactcttttgggaccatcgtgagccgagaggccagtctaacc
tttgcatacttggaaaacttcaagacccaccgaagaaactcagtgtcagttcgcgaggga
cagggggtggtgctgctgtgtggtcccccatctcactctggagatctgacattctcctgg
atttttaatgagtatccctcgtttgtgaagcaggacacacgacgctttatctcccaggag
acggggaatctatacattgctaaagtggagccttctgatgtgggcaactacacctgtgtg
gtgaccaatactgtcaccaaaaccagagtccagggcccgcccacgcctctggtgctgcgc
agtgatggtataatgggtgaatacgagccgaagatcgaagttcagtttccagagattgtc
catgtagccaaaggattgacagtgaaactggaatgttttgcattaggaaaccctgtcccc
tctataaactggaatagagtggatggaatccccttttctaggaaggtggacgtgaggaaa
gccagcggcgttctggaaatcccctatttccagcaggaagacacgggcacatacgagtgt
gtggcagagaactccagggggaagaacactgtaaaaggaaagctgtctttctacgcccct
ccacatctgatagagaaacctgaggatgtgcagaagcccattgatgactctctggtgtgg
gaatgcaaggccaccgggaagcccaagccctcctataggtggatgaagaacggagagaac
ctggagtcactggaggagcgcatacaagttgccaatggagcgttgtcaatcagccagctg
acgctgtccgacattggaatgtatcaatgtgtggctggaaacaaacatggggaggtctac
tccaatgcagagctcagagtcatagctgttgccccagatttctcccagaaccagctgagg
agccccaccatggtgaaggagggaggagacgtgctgatcgagtgccggcccaagatgtcc
ccctggggcgtgatctcctggaggaagggcagcgaggctctacgagagagccacagagtt
tccattctggacaacggaaacctcaggatacagaattcaaccagaccagatgcaggcctt
tacacgtgtgtggcaagaaaccagtttggagtggcaagcagctccgggactctcatggtc
aaagagccgaccattatcaccacggcaccgtccacactggatgtgactgtaggagagagc
atcgtgctgccatgtcaggtgactcatgacccgtctctgaagctcatgttcacctggttc
ttcaacgagcagctgatccactttggcaaccacggcggatactttgaaaaagtgggcggt
cagcattcggctggggacatcatgattcggaacatccagctgagacatgcagggaagtac
acctgtgcggtacagaccaaagtggacagcatctccatcgcagcagacctggtagtccga
ggtcccccaggcccacccaccagcatccatgtagaagaaatcagtgacaccacagcctct
ctctcctggaggcccgggcctgataatcacagtccaattaccacatacactatccaggcc
aggacacccttctccctgggctggcaggctgtcaccacagttcctgaggtggtggggggc
cgccgtctgacagctacagtaatagatctgagcccctgggtggaatatgagttcagagtc
ctggcaagcaacgccattgggaccggggagcccagcaaaccatccaaacaagcaaggaca
aaggagacatctccgaaggtcacaccagctaatgtgagcggaggtggaggcagtcgctca
gaattagtcatcacttgggagcctgttcctgaggagttacagaacgggggaggttttggc
tatgtggtggccttcagaccgtacggagccacaggctggatgcaggccgcagtgccctca
ccagaagcctccaaatatgtcttcaagaacgagagcatccagcccttctcccccttccaa
gtgaaggttggagtgtacaacaacgaaggggaaggcccattcggacccgtcatcaccatc
tactctgcagaggaagagcctggcagagcacccaccaggatccgagccaagagtctgtca
gcgtctgagattgagctttcatggaaagccctgccttggaacaccagcaagagaagagtt
ctaggctatgagttgaggtactgggagaagagagagaaggaggaggtggccagtgtgcag
aggacggtagggaaccagacgtcagccattatccgaggggtgagaggaagcaacacgtac
tatgtcacagtgagagcgtacaacacggccggagctgggcctcctagtgccactgtcaat
gtcaccaccaagaaaccaccgcccagccagcccccagtgaaagtgatgtggaacacactg
aattccaagataatcctgaactgggagcaagtcaaagccttggagaacgagtcagaggtc
actggctacaaagtgctctacaagggtaaccgacacagccgccctagtgtcatggaaacc
aacacgacgtcggtggagctctctctgcctatggatgaggagtacttcatccagatcaaa
ccatttggggagggaggagaggggagcagtagcagacagatcaccatccccagaatacca
ggatccaatgcaattggctcagcgaccaaggtctctactttatctgccctcagtacaata
gcactgtctttcacagcgcgaacatcattatga

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