Coregonus clupeaformis (lake whitefish): 121574819
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Entry
121574819 CDS
T08357
Name
(RefSeq) contactin-4-like isoform X1
KO
K06762
contactin 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cclu04515
]
121574819
Cell adhesion molecules [BR:
cclu04515
]
Immunoglobulin superfamily
Contactins
121574819
BRITE hierarchy
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_C17orf99
V-set_CD47
Tissue_fac
C2-set
Pur_ac_phosph_N
C2-set_2
Motif
Other DBs
NCBI-GeneID:
121574819
NCBI-ProteinID:
XP_041743355
LinkDB
All DBs
Position
10:34637021..34868669
Genome browser
AA seq
1030 aa
AA seq
DB search
MMMLLWKLLVLQSLMGCLAESSVLQSPVFTKQPGSIVFPVDSQENNRDVVFSCEAQGSPT
PLYRWKLNGTAITPKSGSHYSLSGGNLRISNLNKDQDAGTYQCLASNSFGTIVSREASLT
FAYLENFKTHRRNSVSVREGQGVVLLCGPPSHSGDLTFSWIFNEYPSFVKQDTRRFISQE
TGNLYIAKVEPSDVGNYTCVVTNTVTKTRVQGPPTPLVLRSDGIMGEYEPKIEVQFPEIV
HVAKGLTVKLECFALGNPVPSINWNRVDGIPFSRKVDVRKASGVLEIPYFQQEDTGTYEC
VAENSRGKNTVKGKLSFYAPPHLIEKPEDVQKPIDDSLVWECKATGKPKPSYRWMKNGEN
LESLEERIQVANGALSISQLTLSDIGMYQCVAGNKHGEVYSNAELRVIAVAPDFSQNQLR
SPTMVKEGGDVLIECRPKMSPWGVISWRKGSEALRESHRVSILDNGNLRIQNSTRPDAGL
YTCVARNQFGVASSSGTLMVKEPTIITTAPSTLDVTVGESIVLPCQVTHDPSLKLMFTWF
FNEQLIHFGNHGGYFEKVGGQHSAGDIMIRNIQLRHAGKYTCAVQTKVDSISIAADLVVR
GPPGPPTSIHVEEISDTTASLSWRPGPDNHSPITTYTIQARTPFSLGWQAVTTVPEVVGG
RRLTATVIDLSPWVEYEFRVLASNAIGTGEPSKPSKQARTKETSPKVTPANVSGGGGSRS
ELVITWEPVPEELQNGGGFGYVVAFRPYGATGWMQAAVPSPEASKYVFKNESIQPFSPFQ
VKVGVYNNEGEGPFGPVITIYSAEEEPGRAPTRIRAKSLSASEIELSWKALPWNTSKRRV
LGYELRYWEKREKEEVASVQRTVGNQTSAIIRGVRGSNTYYVTVRAYNTAGAGPPSATVN
VTTKKPPPSQPPVKVMWNTLNSKIILNWEQVKALENESEVTGYKVLYKGNRHSRPSVMET
NTTSVELSLPMDEEYFIQIKPFGEGGEGSSSRQITIPRIPGSNAIGSATKVSTLSALSTI
ALSFTARTSL
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgttgctatggaaactgctggtgctgcagtcactcatggggtgcctggcagag
agcagtgtcctgcagagcccagtgttcaccaagcagcctggcagcattgtgttccctgtt
gactcccaggagaacaacagagacgtggtgttcagctgtgaggcccagggaagcccaact
cccctttatcggtggaaactgaatggcaccgcaatcactcccaaatcaggctcacactac
agcctgtctggaggcaacctccgaatcagcaatttgaacaaagaccaagatgctggaaca
tatcagtgcctcgcctccaactcttttgggaccatcgtgagccgagaggccagtctaacc
tttgcatacttggaaaacttcaagacccaccgaagaaactcagtgtcagttcgcgaggga
cagggggtggtgctgctgtgtggtcccccatctcactctggagatctgacattctcctgg
atttttaatgagtatccctcgtttgtgaagcaggacacacgacgctttatctcccaggag
acggggaatctatacattgctaaagtggagccttctgatgtgggcaactacacctgtgtg
gtgaccaatactgtcaccaaaaccagagtccagggcccgcccacgcctctggtgctgcgc
agtgatggtataatgggtgaatacgagccgaagatcgaagttcagtttccagagattgtc
catgtagccaaaggattgacagtgaaactggaatgttttgcattaggaaaccctgtcccc
tctataaactggaatagagtggatggaatccccttttctaggaaggtggacgtgaggaaa
gccagcggcgttctggaaatcccctatttccagcaggaagacacgggcacatacgagtgt
gtggcagagaactccagggggaagaacactgtaaaaggaaagctgtctttctacgcccct
ccacatctgatagagaaacctgaggatgtgcagaagcccattgatgactctctggtgtgg
gaatgcaaggccaccgggaagcccaagccctcctataggtggatgaagaacggagagaac
ctggagtcactggaggagcgcatacaagttgccaatggagcgttgtcaatcagccagctg
acgctgtccgacattggaatgtatcaatgtgtggctggaaacaaacatggggaggtctac
tccaatgcagagctcagagtcatagctgttgccccagatttctcccagaaccagctgagg
agccccaccatggtgaaggagggaggagacgtgctgatcgagtgccggcccaagatgtcc
ccctggggcgtgatctcctggaggaagggcagcgaggctctacgagagagccacagagtt
tccattctggacaacggaaacctcaggatacagaattcaaccagaccagatgcaggcctt
tacacgtgtgtggcaagaaaccagtttggagtggcaagcagctccgggactctcatggtc
aaagagccgaccattatcaccacggcaccgtccacactggatgtgactgtaggagagagc
atcgtgctgccatgtcaggtgactcatgacccgtctctgaagctcatgttcacctggttc
ttcaacgagcagctgatccactttggcaaccacggcggatactttgaaaaagtgggcggt
cagcattcggctggggacatcatgattcggaacatccagctgagacatgcagggaagtac
acctgtgcggtacagaccaaagtggacagcatctccatcgcagcagacctggtagtccga
ggtcccccaggcccacccaccagcatccatgtagaagaaatcagtgacaccacagcctct
ctctcctggaggcccgggcctgataatcacagtccaattaccacatacactatccaggcc
aggacacccttctccctgggctggcaggctgtcaccacagttcctgaggtggtggggggc
cgccgtctgacagctacagtaatagatctgagcccctgggtggaatatgagttcagagtc
ctggcaagcaacgccattgggaccggggagcccagcaaaccatccaaacaagcaaggaca
aaggagacatctccgaaggtcacaccagctaatgtgagcggaggtggaggcagtcgctca
gaattagtcatcacttgggagcctgttcctgaggagttacagaacgggggaggttttggc
tatgtggtggccttcagaccgtacggagccacaggctggatgcaggccgcagtgccctca
ccagaagcctccaaatatgtcttcaagaacgagagcatccagcccttctcccccttccaa
gtgaaggttggagtgtacaacaacgaaggggaaggcccattcggacccgtcatcaccatc
tactctgcagaggaagagcctggcagagcacccaccaggatccgagccaagagtctgtca
gcgtctgagattgagctttcatggaaagccctgccttggaacaccagcaagagaagagtt
ctaggctatgagttgaggtactgggagaagagagagaaggaggaggtggccagtgtgcag
aggacggtagggaaccagacgtcagccattatccgaggggtgagaggaagcaacacgtac
tatgtcacagtgagagcgtacaacacggccggagctgggcctcctagtgccactgtcaat
gtcaccaccaagaaaccaccgcccagccagcccccagtgaaagtgatgtggaacacactg
aattccaagataatcctgaactgggagcaagtcaaagccttggagaacgagtcagaggtc
actggctacaaagtgctctacaagggtaaccgacacagccgccctagtgtcatggaaacc
aacacgacgtcggtggagctctctctgcctatggatgaggagtacttcatccagatcaaa
ccatttggggagggaggagaggggagcagtagcagacagatcaccatccccagaatacca
ggatccaatgcaattggctcagcgaccaaggtctctactttatctgccctcagtacaata
gcactgtctttcacagcgcgaacatcattatga
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