Coregonus clupeaformis (lake whitefish): 121574836
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Entry
121574836 CDS
T08357
Name
(RefSeq) tumor necrosis factor receptor superfamily member 1B
KO
K05141
tumor necrosis factor receptor superfamily member 1B
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04060
Cytokine-cytokine receptor interaction
cclu04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121574836
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
121574836
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
cclu04050
]
121574836
04090 CD molecules [BR:
cclu04090
]
121574836
Cytokine receptors [BR:
cclu04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
121574836
CD molecules [BR:
cclu04090
]
Proteins
121574836
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Motif
Other DBs
NCBI-GeneID:
121574836
NCBI-ProteinID:
XP_041743390
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All DBs
Position
10:complement(12596924..12613392)
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AA seq
458 aa
AA seq
DB search
MILSTVSGILTVRIILAIMVQPVENTVYTLPYTPDSAEDCRNKTAEYYNIDINLCCSKCA
PGTRRKNVCSTTSDTECEPCPSGQYSGTFNYFPKCFRCHKCSEDKGLQYAQNCSSITKAQ
CVCQTGMFCIMDQHPNCKECVSYTHCKPGHGVSIEGTTESDVNCAPCPDGTFSDQHSYTQ
TCQHHTDCVSQRRGVLTYGTTTSNAVCGPKVSPPASPPTTMPTSGTRHTTPSLQSLHNED
KSPGFDLRIVAGVIGGVIGGVILLLIISTIIYKKAFTGSRLVSSTEHVNGNCEAIKFDCD
GPMILQNSSFITSYQEQQQCLLGKGNCIYPSQAENQQDARRTRVLGCSNILEGLSIGPLQ
STPPPSSTQSSTNQPSPQPISPQPISPLPSSPLVNVNITVNYPIGNGSCSTPTSTHIDSS
QADSELPLSREEEVYVNMPQQEGGKEALTAIQESGNDV
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgatactaagcactgtaagtggcattcttacagtaaggattattctcgcgatcatggtt
cagcctgttgagaacacggtgtacactctgccatacacaccagactctgctgaagactgt
cgcaacaaaacagctgaatactataacatagatataaacctgtgctgcagcaagtgtgct
cctgggacacgccggaagaatgtatgcagcactacctcagacacagagtgtgaaccatgt
cccagtggccaatacagtgggaccttcaattacttcccaaaatgcttcagatgtcacaag
tgttccgaagacaaaggcctgcagtatgcccagaattgctccagcatcaccaaagcccag
tgtgtgtgtcagactgggatgttctgcataatggatcagcacccaaactgtaaggagtgt
gtcagttatacacactgcaaacctggccatggtgtctccatagaagggacaacagagtca
gatgtgaactgtgcaccatgccctgatggaaccttctctgaccagcactcctacacccag
acctgccagcaccacacagactgtgtttctcagagaaggggtgtactaacttatggtacc
accacctcaaatgcggtgtgtggacctaaggttagcccaccggccagcccaccgaccaca
atgcctacctctggtacaaggcataccacaccaagtctacagagcctgcataatgaggac
aaatcaccaggctttgaccttcgtatagttgcaggcgttatcggaggtgttatcggaggt
gttatcctgctgctgatcataagcacaatcatttacaagaaggccttcacagggtccagg
cttgtatcttctacagaacatgtaaatggaaattgtgaggccattaaatttgattgtgat
ggaccaatgattcttcagaacagttcattcattaccagctatcaggaacagcagcaatgt
ctgctgggaaagggaaactgcatatatcccagtcaggcagagaaccagcaggatgctaga
aggaccagggtgttagggtgctccaacatcctcgagggcctgtcaataggccccctccag
tccacccctccaccatccagcacccagtccagcaccaaccaacccagccctcaacccatc
agcccccagcctatcagtcccctgccatctagccccctagttaatgtcaacatcactgtt
aactaccctataggaaatgggtcatgctccacacctaccagcacccacatagactcatcc
caggctgactctgagctccctctatcaagggaggaggaggtgtatgtcaatatgccacag
caagagggcggaaaagaggcacttacggcaatacaggagagtggaaatgatgtttga
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