Coregonus clupeaformis (lake whitefish): 121574858
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Entry
121574858 CDS
T08357
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-2 isoform X1
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04260
Cardiac muscle contraction
cclu04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121574858
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
121574858
04261 Adrenergic signaling in cardiomyocytes
121574858
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121574858
Ion channels [BR:
cclu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
121574858
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
Cache_3-Cache_2
MCP-like_PDC_1
dCache_2
Motif
Other DBs
NCBI-GeneID:
121574858
NCBI-ProteinID:
XP_041743430
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Position
10:complement(11322392..11601855)
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AA seq
1112 aa
AA seq
DB search
MAICAQSYGICCLFSIQTILIISFSSPATGSLRFPQHYTMMHWAGRIEKELEKTIQLVTG
TEQIRGIYNEKKSQFDIKRNNPKDLVERVARDIAKLLTSKRRALERLAREAEQLQTDFPW
LDSIKESDMEYYDSKAESDYTEDGDGEENLMENPYSMKLEFVDDPNFKNKVNYSYSAVQI
PTDIYKGSPVILNELNWTQALERVFIDNRREDSSLRWQVFGSATGVTRYYPATPWRAPNK
IDLYDVRRRPWYIQGASSPKDMIIIVDVSGSVSGLTLKLMKTSVMEMLDTLSDDDYVNVA
RFNEKADAVVPCFKTLVQANMRNKKIFKESIMHMQAKGTTDYKSGFQFAFEQLLNDTGAP
RAGCNKMIMMFTDGGEDRAQDIFEKYNWPNKTIRVFTFSVGQHNYDVTPLQWIACANKGF
YYEIPSIGAIRINTQEYLDVLGRPMVLAGPKAKQVQWTNVYQDALGLGLVITGTMPVFNL
TADANSQTQLVLGVMGVDVAINEIKRKTPTYRLGANGYTFAIDQNGYLLLHPNLQPKIIN
FREPVTLDFLDAELEDSKKEEIRREMIDGKSGQKKIKTLIKSVDERYIDEAMRTYTWTPV
EGTDYSLGLVLPTYSENHIKANLSDQILQVQYFESLLPNSFESEGHVFIAPREYCNELEL
SNNNTEFLLNFIALMEKVTPDSKQCDNLLLHNLILDTGIIRQLVEKVWKTKDLTTYGFLA
VFAATDGGITRVYPNKAAETWEEDPEPFNASYYRRSLDNKGYIFRAPYRTVNDELLNPEN
DTIGILVSTAVEIIVGGKTIKPAVVGVKLDLEAWVDKFKILASNQTSPTSDNRQVQQTCG
PTSGCEMDCDANSEDLLCYLVDDGGFMIMSNQKDHWNKIGMFFSEVDPYLMHALYNNSFY
NRKQSFDYQSVCDPVPSSNTGAAPRGVFVPTIVDFVNLAWWSSAAAWSLFQQLLYGMAYH
SWFVTDEVEAEGMDSRETSCVTIQTQFYFTNISSSYDILQDCGNCSRLIHAKRLNNTNLL
FVVAEKMPCNTCEVEKLSQAETEFKDENPSCEDMSAARYRKGPTVCYDYNLSENTSDCGR
GHSFRPSLQTLLMIQLFLLYPIASPHILPLLL
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggcgatctgcgctcagtcctacggtatctgctgtctgttctcaatccaaactatcctc
atcattagcttctcttcgccggcaacggggagcctccgttttccccaacactacacaatg
atgcattgggcaggccgcattgagaaggagctggagaagactatacaactggtcactgga
actgaacagataagagggatttacaatgagaagaagagtcagtttgacatcaagaggaac
aatcccaaggacctggtggagagggtggcacgagacattgccaagctgctcactagcaag
aggagagccctggagaggctggccagggaggcggagcagctgcagacagattttccctgg
ctggacagtatcaaggagagcgacatggagtactatgattcgaaagcggaatcagactat
acggaggacggagatggggaagagaatctgatggagaacccctactccatgaagctggag
tttgtggacgatcccaactttaaaaacaaggtcaactactcctatagcgccgtccagatc
cccacagacatctataagggctcaccagtcatcctgaatgagctgaactggacccaggct
ctggagagggttttcattgataaccgccgggaggacagctctttgcgctggcaggtgttc
ggcagcgccacgggggtcacaagatactacccagctactccatggagagcacccaataag
attgacctgtatgatgtccgcaggcggccatggtacatccaaggggcatcatctcccaag
gacatgatcatcattgtggacgtgagtggcagtgtcagtggactcactctgaaactgatg
aagacgtcggtgatggagatgctagacactctgtcagatgacgactatgtgaatgtagcc
aggtttaacgagaaggccgatgctgtcgtcccctgttttaagaccttggtccaggccaac
atgagaaacaagaagatcttcaaggagtccatcatgcacatgcaagccaaaggaaccact
gactacaagtctggcttccagttcgccttcgaacagctactcaatgataccggcgccccg
agggcaggctgcaataagatgataatgatgtttacagatggaggggaggatcgtgcacag
gacatctttgagaagtacaactggcccaacaaaaccattcgagtatttaccttttcagtc
gggcagcacaactatgatgtcacccctttgcagtggatagcttgtgccaataaaggattc
tactacgagattccatccattggagccattagaattaacacacaggagtacctggatgtg
ctgggtcggcccatggtgctggcagggcccaaggccaagcaggtccaatggaccaacgtc
taccaggatgctctgggtctgggtctggtcataactgggaccatgccggtcttcaacctc
accgctgatgccaactctcagactcagctcgtccttggtgtcatgggagtggatgttgcg
atcaatgaaattaagaggaagacaccaacatacaggcttggagccaatggatacaccttt
gcaatcgaccaaaatggctatttgctcctgcaccccaacctgcaacctaagatcattaac
ttcagagagcctgtcaccctggacttcctggatgctgagctagaggacagtaaaaaggag
gagatccgtcgagaaatgatcgatggcaaatcagggcaaaagaaaatcaagactctcatt
aagtcagttgatgagaggtacattgatgaggctatgcggacatacacctggacaccagtg
gagggcacagattacagtctagggctggtactgcccacatacagtgagaaccacatcaag
gctaacctgagtgaccagatcctgcaggtgcagtattttgaatctctgctgccaaacagt
tttgagtctgaaggacatgtattcatagctcccagggaatactgcaacgagctagagctc
tccaacaacaacactgagttcctgcttaacttcatcgctctcatggagaaggtgacacct
gactccaaacaatgtgacaacctgctccttcataacctcatcctggacactggcatcatc
agacaactggtggagaaggtgtggaaaaccaaagacctcaccacatatggctttctggca
gtgttcgctgcaacagatggagggattacaagagtgtatcccaacaaggctgctgagact
tgggaggaggaccctgagccttttaatgccagctattaccgccggagtctggacaacaag
ggctacatcttcagagcgccttatcgcaccgtgaatgatgagctgctgaacccagagaac
gacaccataggaatcctggtcagcactgcagtggagatcatagtgggagggaagaccatc
aaacctgcagtggttggagtaaagctggaccttgaggcctgggtggacaaattcaagatc
ttggctagcaaccaaacaagtccaacaagtgacaaccgccaagtccaacaaacgtgtgga
ccaaccagtggctgtgagatggactgtgacgccaacagcgaagaccttctgtgttacctg
gtggatgacggtggttttatgatcatgtccaatcagaaggatcactggaacaagattggc
atgttctttagtgaagtggacccctacctgatgcatgctctctacaacaactccttttac
aaccggaagcagtcctttgactaccagtctgtgtgtgaccccgtgccaagcagcaacacc
ggggctgcgccaagaggagtctttgtgcccaccattgtggactttgtgaacctggcttgg
tggtcatcagcagctgcctggtccctatttcagcagctgctctatggaatggcctaccat
agttggtttgtcacagatgaggtggaggccgaggggatggactccagagagaccagctgt
gtgacgatacagactcagttctacttcactaacatcagcagctcctatgacatcctgcag
gactgtggcaactgctccaggctgatccatgccaagaggttaaacaacaccaacctgctg
tttgtggtggcagagaagatgccctgcaatacctgtgaggtagagaaactgtcccaggcg
gagactgagttcaaggacgagaacccatcatgtgaggacatgagtgcagcgaggtatcga
aaagggcccactgtgtgctacgactacaatctctctgagaacacatcagactgtgggcgg
ggccactccttccgcccctcactccagaccctgctcatgattcagctcttcctcctctat
ccaatcgccagcccccatattctgcccctcttactttaa
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