Coregonus clupeaformis (lake whitefish): 121574963
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Entry
121574963 CDS
T08357
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 5
KO
K05724
FYVE, RhoGEF and PH domain containing 5/6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121574963
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
121574963
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
RHG20_PH
IQ_SEC7_PH
FYVE_2
PH_20
PH_9
PH_11
Motif
Other DBs
NCBI-GeneID:
121574963
NCBI-ProteinID:
XP_041743604
LinkDB
All DBs
Position
10:28935576..29031090
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AA seq
1420 aa
AA seq
DB search
MLTDVVPLDNTSATDTHIAVEEENSKETDDLNLESDNNDTSVDPEDVLMQCLSEYDRGHE
EAECVKERREEEQILFEKTETAKEPTECPEEDVVEPNTEDYDHGNSPSQPAADTDSGLED
EDSSPGVYLQCKVPTDEEAEVLSLGAHCCALPPVCEEYPYDVIGPSDEPVYTCDTGESGD
TGVWQPERATKDPSGRFHFSGSTEDMFGPYSVIEAVPADRMSTADPEVNHDDTCCGDKPH
TPKEMDTAGTSNQEPYYVSSDDMAELEDKQKLSEECEVQDSPEQSSQHRETAKEDMDEYA
DIDDSLCPETHDFQQLEGASSEDYVEIGDDDETDDTERKQIRGRSVRERTAKREQAFSSQ
RNSCQPRLRLCNITVPADLDRTRTPELTNRVVFAHTTEAFEEDIEELDGHILPYYEDSNS
DSEEHIYEEAGFDSDGENFISKSIVMRSRSYSGKVPGYVPETVPEETSEYQSTHDYCTVA
LDLNGEPLVRPEQPEINRLIPSLKPRRFLLYPRSYSVEGRELSSGIHTEADQSLKEDGRM
KRTDDTLSLPCVVTSSGSFSQRSHQSSSGVSTPTSLVDIPPPFELAYITKRPVTKSSPSL
LISVSPESTDNKPKKKKSSLKRFLALKFKRKTDTKGFGDGSIRSSRSSSESSHHGPMRIL
DLERRSTGSPQPQSQSRMVKPQQRPPDLPSTFLPYKDRRKGDPKAYGSRGVSRVESFEER
SRRPLMPLPLTKPRSISFPSADTSDYENIPAMSSDYENIQIPPGRRPTRSMTVTEFFEDP
NRMVAPSNDNDGYVDMNSFPGIDSKPQSPEQEPESAYTEPFPVNHTPAGLSAEEDHGCTS
EEEEGGVEHGYDKQIDGRSRAFYVAKELVDSERLHVKALKLLQEDFRAAVLEAVGEDGEP
VVEEQRLGEILGTLPEVYILHSNILTELDACIRQWEESQQVVDVILSRREEFAVFATYIS
EYDRSMSLLAESCKLNSAFHYIVKQFEKQGPEGAQVPLRHQLLQVIVRVLQYRMLLTDYL
NNLSPDSKEYEDTQAALVIVSEAADQANDNLKQGDNLIRLVHIEYSVRGKRDLLKPGRVF
VKEGTLMKVSRKSRQPRHLFLMNDVMLYTYPQQDGKYRLKNTLYLSGMKVSIPVIDNVLN
ALRIEVSDITITLSASSCGEREDWFHTLSRAIADHAAGLCTFGGPCSEGREKLWMALGEA
APVLVPVSHVMMCMSCTSDFSLTLRRHHCNACGKVVCRACSRNRYPLKYLKDRMAKVCDH
CYAELRKRGGSISGVCGNSSPFTHRASRPLSAVFQSLQPPSLWRSRKITSPLNQVALGAE
GSAMSGSLQRRKKSKRKWKRLWFILKDKVLYTFTAREDKVACESLPLQGFTVKLTERPEG
EESFNVFQLYHKKTLYYTFRADDQHTARRWVNAMEEATVL
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atgttgaccgatgtggtcccattggataacactagtgctactgacactcacattgctgta
gaggaggaaaactcgaaagaaacagatgacttgaaccttgagagtgacaataatgacaca
tctgtggaccctgaagatgtgttgatgcagtgtctctcagagtatgatagagggcatgag
gaagcagagtgtgtcaaagagcggagggaggaggaacagattttatttgaaaagactgaa
acagccaaggaacctactgaatgcccagaagaagatgtagtagaaccaaacactgaggat
tatgatcatggtaactcccctagtcaaccagctgcagacactgacagtggacttgaagat
gaggacagctcccctggtgtatatttgcagtgcaaggtacccactgatgaagaagcagag
gttctctctctgggagcacactgctgtgcactcccacccgtctgtgaggagtatccctac
gacgtgattggcccctcagatgagcctgtttacacatgtgacacaggtgagtccggtgac
acaggcgtgtggcagcccgagcgtgccacaaaggacccctctgggcgtttccatttctct
ggcagcactgaggatatgtttgggccttactccgtcatcgaggcagtgcctgctgacagg
atgagcactgctgaccctgaggtgaatcatgatgatacatgctgtggtgacaaaccacac
actccaaaggagatggacacagcaggcacctctaaccaagagccttattatgtgtcttcg
gacgacatggcagagctagaggataaacagaaactctcagaagagtgtgaggtccaggac
agtcctgagcaatccagccaacacagagaaacagctaaagaggatatggatgaatacgca
gacatcgatgactccctctgcccagagacccatgactttcagcagctggagggtgcctca
tcagaggactatgtggagattggggacgatgatgagacggatgacactgagaggaaacag
atcagagggaggagtgtgagagagagaacagccaagcgtgagcaggctttctccagccag
cggaacagctgccagccccgtctcaggctgtgtaacatcacagtgccagcagacttggac
cggacccgtaccccagagctcaccaacagggtggtgtttgcccacaccacagaggccttc
gaggaggacattgaggagctggacggccacatcttgccttattacgaggactccaactca
gacagtgaggagcacatctatgaggaggccggctttgactctgatggggagaactttatc
tctaagagcattgtgatgcggtcacgctcctactctgggaaagttccgggttatgtccct
gagacggttcctgaggagacatcagagtaccagagtactcatgactactgtactgtggcg
ttagacctgaacggagaacctctggtacgtcctgagcagcctgagatcaacagacttatc
ccctctctgaagccacgccgcttcctactatacccacgctcatactccgtagagggtcga
gaactgtcatcgggcattcacacagaggctgaccaatcgctgaaggaggatggcaggatg
aaaaggacagatgacaccctctctctgccatgtgttgtcacttcttccggaagcttctct
cagcggagccaccagtcatccagcggtgtttccacgccaacttctctggtagacattcca
cctccctttgaattggcttacatcaccaagagaccggtcactaagagctccccgtccctc
ctgatcagcgtctctcctgagtccacagacaacaagcccaagaagaagaagtcctcactc
aagcgcttcctggccctgaagttcaagaggaagacagacactaaaggctttggtgacggg
agcatccgctcctcgcgctcctcctctgagtccagccaccatggcccaatgagaatcctg
gacctagagcgcaggagcactggctccccacagccccagtcccagtctcgcatggtgaag
ccccagcagcgccctccagacctgccctcaaccttcctgccctacaaagaccgcaggaaa
ggagaccctaaagcctacggaagcaggggtgtgtccagggtagagtccttcgaggagcgc
tcccgccgacccctcatgcccctccccctgaccaaaccccgctccatctccttccccagt
gcagacacatcagactatgagaacatcccagctatgagctctgactatgagaacatccag
atcccccctggaaggagacccaccagatccatgactgtcacagagttctttgaggacccc
aaccgcatggtggccccctctaatgacaacgatggctatgtggatatgaacagcttccct
gggatcgacagcaaaccccagtcacctgagcaggagcctgaaagtgcctacaccgagcct
ttcccagtgaaccatactccagcagggctctcagctgaggaggaccatggatgtacctca
gaggaggaggagggaggagtggagcatggctacgacaaacagattgatgggcggtccaga
gccttctacgtcgccaaagagctggtggattctgagagactacatgtaaaggccctcaag
ctccttcaagaggacttcagggcagcagtgttggaggcggtgggggaggatggggaacct
gtggtggaggaacagaggctgggggagatacttggcacgctccctgaggtctacatactc
cacagcaacatcctcaccgagctggatgcatgcatcagacagtgggaggagagccagcag
gtggtggatgttatcctgtctcgtcgggaggagtttgctgtgtttgctacctatatctct
gagtatgaccgcagcatgtccctactggcagagagctgcaaactcaactctgcgttccat
tacatcgtcaagcagtttgagaagcagggcccagaaggagctcaggtcccactgaggcat
cagctgctgcaggtcattgtgagagtcctccagtatcgcatgctgctcacagattactta
aataacctctcccctgattctaaagaatatgaggatacacaagctgccttagtaattgtg
tcagaggcggcagaccaggctaatgacaatctcaagcaaggggataatttgattcggctg
gtccacattgagtacagcgtcagaggcaagcgagatctactcaagccaggaagggtgttt
gtgaaggaaggcaccctaatgaaagtgtcgaggaaaagcagacagcccagacacctgttt
ctgatgaatgacgtgatgctgtacacctaccctcagcaggatggtaaatacaggttgaag
aacactctctatctgtctgggatgaaggtcagtatacctgtcatagacaacgtgcttaat
gcactgaggatcgaggtgtctgacatcaccatcaccttgtcagccagctcctgtggagag
agggaagactggttccacacgctgagtcgggccatagcagaccatgctgcaggcctttgt
acctttggtggcccctgcagtgagggacgtgagaagctgtggatggccctgggggaggca
gctccagtgctggtgcccgtgtctcatgtgatgatgtgtatgagctgtacctctgacttc
agcttgaccctgagacgccaccactgcaacgcctgtgggaaggttgtgtgtcgtgcctgc
tccaggaacaggtatcctctgaagtatctcaaagacaggatggccaaagtgtgtgaccac
tgctatgctgagctcaggaagagagggggcagtatctcaggggtgtgtggtaactccagc
cccttcacccaccgggccagtcggcccctctcagctgtgttccagagcctacagccccca
agcctgtggagaagcaggaagatcacctcccctctcaaccaggtggcattgggggctgag
ggctcggccatgagtggcagcctgcagcggcgtaagaagagcaagaggaagtggaagagg
ctgtggttcatcctcaaagacaaggtgctctacaccttcacagcacgtgaggacaaggtg
gcatgtgagagtctgcccctgcagggtttcacagtgaagctgacagagaggccagaggga
gaggagagcttcaacgtgtttcagctctaccacaagaagactctatactacacctttaga
gcagatgaccagcacactgcccgcaggtgggtcaatgccatggaggaggccacagtatta
taa
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