Coregonus clupeaformis (lake whitefish): 121574969
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Entry
121574969 CDS
T08357
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1-like
KO
K12666
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 1 (ribophorin I)
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00510
N-Glycan biosynthesis
cclu00513
Various types of N-glycan biosynthesis
cclu01100
Metabolic pathways
cclu04141
Protein processing in endoplasmic reticulum
Module
cclu_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
121574969
00513 Various types of N-glycan biosynthesis
121574969
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121574969
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Motif
Pfam:
Ribophorin_I
Motif
Other DBs
NCBI-GeneID:
121574969
NCBI-ProteinID:
XP_041743616
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Position
10:complement(29333637..29338608)
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AA seq
602 aa
AA seq
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MARSIPFCAVPTCLLLISGLCYRVAADGLVNEEVKRTVDLSTHLAKITAEIILSNQGDSA
VHSFILAVEPDLAPNLAYVGASVKGDEEEDGILELKQTTIQGQSGEFYKVQLPSSLGVGA
KLRVKVETVLSHILRPFPTHITQAERQLVVFQGNHYLYSPYPTRSQTTRVRLASKTVESY
TKLGNPSKSDEAIEYGPFRDVAPFSEDALKVHYENNTPFLTISSITRIIEVSHWGNIAVE
ETIDMRHTGAFLKGPFSRYDYQRQSDSGISSVKSFKTILPASAQDVYYRDEIGNISTSHL
QILEDSVEVEVRPRFPLFGGWKTHYIIGYNLPSYEYLYTLGDQYALKMRLVDHVYDDQVI
DSFTVKLILPEGARNIHVETPYPIDRIPDQLHYTYLDTFGRPVLVASKNNLVEQHIQDVV
VHYTFNKILMLQEPLLVVGAFYILFFTVIIYVRLDFSITKDPAAEVRMKVSSITEQVLTL
VNKRLGLYRHMDEVVNRYKQSRDTGALNSGRKTLEADHRTLTNDISSLQARLKAEGSDLA
DKVGEVQKLDGQVKELVCRSWQEAERLVAGKVKKEAYIDNEKTLASKRLELVTRVDSLLD
TL
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgaagcatacccttctgcgccgtcccaacttgtctgctccttatcagcggactg
tgttatcgagtggctgccgacgggctggtgaacgaggaggtgaaacgaacggtggaccta
agcacgcaccttgctaaaataacagcagagattattctgtcaaaccagggagactccgcg
gtacatagctttatcttggcagtagagcccgacttggcccccaacctcgcgtacgtcgga
gcatcggtgaagggtgatgaagaggaggatggcatacttgagctcaagcagacaactatc
caaggccaaagtggggagttctacaaggtgcagttaccctccagtctgggtgttggcgca
aagctgcgagtgaaggtggagacagtcctgagccacatcctgaggcccttccccactcac
atcacccaggctgagcgtcagctggtggtgtttcagggcaaccactacctgtactctccc
taccccacccgcagccagaccacccgtgtccgcctcgcctctaagactgtggagagctac
accaagctgggcaatcccagcaagagcgatgaggccatcgagtacggccccttccgtgat
gtcgccccattcagtgaggatgccctgaaggtccattatgagaacaacacccccttcctc
accattagcagcatcacccgcatcattgaagtctcacattggggaaacattgctgtggaa
gagaccatcgacatgaggcacacaggggcattcctgaaaggtcctttttcccgttatgac
taccagcgccagtctgacagtggcatctcatcagtcaaatcctttaagaccatccttcct
gcctcagcccaggatgtgtactaccgggatgagatcggcaacatctccacctcccacctc
cagattctggaagactctgtggaggtggaggttaggccccgcttccccttgtttggtggt
tggaaaacccactacattatcggctacaatctgcccagctacgagtacctctacaccctg
ggggatcagtacgctctgaagatgaggctggttgatcatgtatatgatgaccaggttatc
gactccttcactgttaaactcatactgccagaaggcgccaggaacatccatgtggaaacc
ccctaccccattgaccgtattccagaccagctgcattacacctacctggatacctttggc
cgtcccgtgctggtggcctctaagaacaacctagtggagcagcacatccaggacgtagtg
gtgcattataccttcaataagatcctgatgctgcaggagcccctgttggtggtgggggcg
ttctacatcctcttcttcactgtcatcatctatgtgcgcctggacttctccatcactaag
gaccctgctgcagaggttcgtatgaaggtctcctccatcacagagcaggtcctgaccctc
gtcaacaagcgtttagggctgtaccgccacatggatgaggtggtgaatcgctataagcaa
tctcgagacacgggtgccctgaacagcggccgcaagaccctggaggccgatcaccgcacc
ctcaccaacgacatcagctccctgcaggcacgcctcaaagcagagggctccgaccttgca
gataaggtgggtgaggtgcagaagctggacggccaggtgaaggagctggtgtgtcgctcc
tggcaggaggctgagcgtctggtggcaggcaaggttaagaaggaggcctacatcgacaac
gagaagaccctcgctagcaagagactggagctggtgacccgggtcgacagtctgctggac
accctgtaa
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