KEGG   Coregonus clupeaformis (lake whitefish): 121574970
Entry
121574970         CDS       T08357                                 
Name
(RefSeq) ras-related protein rab7
  KO
K07897  Ras-related protein Rab-7A
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04137  Mitophagy - animal
cclu04140  Autophagy - animal
cclu04144  Endocytosis
cclu04145  Phagosome
cclu04148  Efferocytosis
cclu05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    121574970
   04145 Phagosome
    121574970
   04140 Autophagy - animal
    121574970
   04137 Mitophagy - animal
    121574970
   04148 Efferocytosis
    121574970
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    121574970
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cclu04131]
    121574970
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cclu04147]
    121574970
   04031 GTP-binding proteins [BR:cclu04031]
    121574970
Membrane trafficking [BR:cclu04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    121574970
Exosome [BR:cclu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   121574970
  Exosomal proteins of other body fluids (saliva and urine)
   121574970
  Exosomal proteins of colorectal cancer cells
   121574970
  Exosomal proteins of bladder cancer cells
   121574970
GTP-binding proteins [BR:cclu04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    121574970
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase ATP_bind_1 cobW PduV-EutP nSTAND3 Septin AAA_16 AAA_7 NTPase_1 AAA_22 AAA_24 G-alpha AAA_5 ATPase_2 NACHT NB-ARC AAA_14 SRPRB ABC_tran ATP-synt_ab
Other DBs
NCBI-GeneID: 121574970
NCBI-ProteinID: XP_041743617
LinkDB
Position
10:29390039..29404196
AA seq 207 aa
MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ
IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF
VVLGNKIDLENRQVTTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV
ELYNEFPEPIKLDRNERAKPSAEACSC
NT seq 624 nt   +upstreamnt  +downstreamnt
atgacgtctaggaagaaagtactactcaaagtcatcatcctgggagactctggagttggg
aagacctcgctgatgaaccagtatgtgaataagaagttcagtaaccagtacaaagccaca
ataggagctgatttcctgacgaaagaggtgatggtggatgacagacttgtcaccatgcag
atctgggacacagcagggcaggaaaggttccagtctctgggtgtggcgttctaccgcggg
gcagactgctgtgtgctggtgtttgatgtaactgcccccaacaccttcaagacgctagac
agctggagggacgagttccttatccaggccagcccccgagatcccgagaacttccccttt
gtggtgctaggcaacaagattgacctggagaacagacaggtgacgaccaaacgagcacag
gcctggtgtcagagcaagaacaacatcccctactttgagaccagcgctaaggaggccatc
aacgttgaacaggctttccagactatcgcacgcaatgctcttaaacaggagactgaggtg
gagttgtacaatgaatttcctgaaccgataaagctggacaggaacgaacgggccaagcca
tcagcggaggcctgcagctgctga

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