Coregonus clupeaformis (lake whitefish): 121574996
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Entry
121574996 CDS
T08357
Name
(RefSeq) PHD finger protein 20 isoform X1
KO
K18402
PHD finger protein 20
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121574996
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
121574996
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_5
Tudor_3
PHD
MBT
Tudor_2
DUF4537
SH3_Hsr9
zf-C2H2
Motif
Other DBs
NCBI-GeneID:
121574996
NCBI-ProteinID:
XP_041743672
LinkDB
All DBs
Position
10:31046798..31060525
Genome browser
AA seq
1055 aa
AA seq
DB search
MEYAQSLSPKQEVDVDTMSKTPPNRRGITFEVGATLEARDALKNWYPANIEKIDYDDEKV
LIHYRQWSHRYDEWFDWTSPYLRPVERIQLRRQGLLDDCPIPVRDGFHVNDKVLASWSDC
RFYPAKVLAVNKDASYTVKFYDGVVQTVKGIHVKPFVRKRGGGKTRSAERNGVKKPQNGR
DKRPQEYGPKNKRTRRSTSDQEGDSDTEDGDDEDDWHEREGEEKTKRKDSEGDVTKEIPP
IVKQEEDIEQHAGQNNLRDHMTATVDPTGVKVEEDGGQSEERPTHNLNEGIKKEEEEIKT
VYTVLSSPNETKPPIESPNQMSTQTGPVSVPLPSAIPTNDRVEQKAASQPDSSKPALLVL
PVKPIRKQGFHNPNRFSREPLYRVIKNQPPPVLSINLDHNPFKCSAVGCTKSFRKAKLLH
YHMKYYHGEDQQLEDDLSPTRSVHTRASEKHPSPNSLESPKRRRTISASMHSTVHSPTRT
PPSPRSEAKTMNRRTSAPSAVNTQRQQQRALLREKSKENQLDRNGQRPVETETTESSGMD
ICLSLVKERDRLKDKKQRDFLRINLKKKKKKKKKAKFEYTGSEENIDISIFALQSKLNLP
LKFPLSHNHKPESYHCRPGYNQSEQMHVDDEDSISDWSTDSCEWSDDELGAELDNTTPPL
NLGSVALETGSQEVVRCVCEAEEENDFMIQCEECLCWQHGTCMGLLEDNVPEKYACYICR
DPPGQRQSLRYRYDRDWLSSGHMYGLSFLDENYSHQNAKKIAATHQLLGDVQRVVEVLNG
LQLKMSVLQTQTHPDLQLWCQPWKRAERPWRRGGSGTGTDAAPSPAPTDEGSERDHKSLA
RGGAEALMSAAMEKLSRASSSSSSSSSSPYQSFQDSYILSEHCYQKPRAYYPAVEQRLVV
ETTRRGSELEDSLRSTEDLLEREQRYGGMLETARPKAHTHLNTRTKGSDVGRWGQAEVKR
EEGVGCGGGGDVDGSGQQHQWQINLLDHIDAVQDEVTHRMDFIERELDVLESWLDYTGEL
EPPEPLARLPQLKHRMKLLLTELAKVQQIALCCST
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atggaatatgctcaaagtctctccccaaagcaggaggtggatgtggacacgatgagcaag
acaccccctaacagaagaggaataacgtttgaggtgggagcaacgctagaggccagagac
gccctcaaaaactggtatccggccaacatagagaagattgactatgatgacgagaaggtc
ctgatccactaccgtcagtggagccaccgctatgacgagtggtttgactggaccagcccc
tacctgagacctgtagagaggatccagctgagacgacagggactgctggacgactgtcct
atccctgtaagagatggatttcatgtgaatgacaaggtcctcgccagttggtctgattgc
cgcttctaccctgccaaggtcttggcagtgaataaagatgcatcttacaccgtgaagttt
tatgatggagtcgtccagacggtgaaggggatccatgtgaagccttttgtcagaaagaga
ggaggagggaagactcggtctgctgagaggaacggagtcaagaagccccagaatggcaga
gacaagaggcctcaggaatacggccccaagaacaaaagaaccagacgcagtacctctgac
caggagggggacagtgacacagaggatggtgatgatgaagatgattggcacgagagggag
ggggaggagaagaccaagaggaaggatagtgagggggacgtcaccaaagagataccaccc
atagttaagcaggaggaggatatagagcaacatgcaggacagaacaacctcagggatcac
atgacagccactgtggacccgactggagtaaaagtggaagaagacggaggacagagtgag
gagaggcctactcataatttaaatgaaggtataaagaaagaagaggaggaaataaaaact
gtgtacacagtcctgagttcacctaatgaaactaagccacccattgagtcacccaatcag
atgtcaacacagaccgggccagtgtctgtcccattaccctcagctatccccaccaatgac
agagtggagcagaaggcagcaagccaaccggatagctccaaacctgcactgctggtcctc
ccagtgaaaccgataaggaagcagggtttccacaaccccaacagatttagcagagagcca
ttgtacagagtgatcaaaaaccagcctcccccggtcctgtccatcaacttggaccacaac
ccatttaaatgcagcgctgtaggctgcaccaagtcattccgcaaggccaagctgcttcac
taccacatgaaatactaccatggagaggaccagcagctagaggacgacctcagccccacc
aggagcgtccatacccgggcctcagagaagcacccctcccctaactctctggagagtcct
aagaggagacgcaccatctccgcctcaatgcactccactgtgcacagtcctactagaact
cccccgtctccacgtagtgaggccaagacaatgaacagacgcacatcagctccatctgct
gtcaacacccagcgccagcagcagagggctctactgagggagaagagcaaagagaaccag
ctggacaggaatggacagagaccggtggagacagagactactgagagcagtggtatggac
atatgtctgtcattggtgaaagaacgagatcggctgaaagataagaaacagagggacttc
cttcgcattaatctgaagaagaagaaaaagaagaaaaagaaggccaagtttgagtacaca
ggtagtgaggagaatattgacatctcaatatttgctcttcagtccaaattgaatttgcca
ctcaaattccccctctcacacaatcacaagcctgagtcctaccactgcaggcccggatac
aaccagtcagagcagatgcacgtggatgatgaggatagcatcagtgattggtccactgac
agttgtgagtggagtgatgatgagctgggggcggagctggacaatactacaccaccccta
aatctgggctctgttgccttggagacaggcagtcaggaggttgtgcgttgcgtctgtgag
gcggaagaggaaaacgacttcatgatacagtgtgaggagtgtctgtgctggcagcatggc
acctgcatgggcctcctggaggacaacgtcccagaaaaatatgcctgctacatctgcaga
gacccaccaggtcagaggcaaagcctgcggtaccggtatgaccgtgattggctgagcagc
ggtcacatgtacggtctatccttcctggatgagaactactcccaccagaatgcgaagaag
attgcagcaacacaccagctactaggagacgtacagcgtgtggtggaggtgctcaatggc
ctccagctcaagatgagcgtcctacagacccagacccacccggacctgcagctgtggtgc
cagccctggaagcgggcagagaggccctggaggagaggtggctcggggacgggcacagat
gcagcaccctctcccgcgccaacagacgagggctccgagagggaccacaagagtctcgcc
cgtgggggcgcagaagctctgatgtcagccgccatggagaagcttagccgagcctcctct
tcctcctcgtcgtcttcctcctcaccctaccagtcgttccaggactcgtacatcttgagt
gagcactgctaccagaagccgcgggcatactaccctgcagtggagcagaggctggtggtg
gagaccacacggaggggctctgagctggaggacagcctgaggagcacagaggacctgctg
gagagagagcagcgctatggaggcatgctggagacagccaggcccaaagcccacacacac
ctgaacactcgcaccaagggttcagatgttggtcggtggggccaggctgaggtgaagcgg
gaggagggtgttggctgcggtgggggaggggacgtagatggcagtggccagcagcaccag
tggcagatcaacctgctggatcacatagatgctgtacaggacgaggtcactcacaggatg
gatttcatcgagagggagctggatgtgttggagagctggctggactacacaggagagctg
gagcccccagagcctctggcccgcctgcctcagctcaaacaccgcatgaagctgctgctt
acagagctggccaaggtgcagcagatcgccctgtgctgctccacataa
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