Coregonus clupeaformis (lake whitefish): 121574997
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Entry
121574997 CDS
T08357
Name
(RefSeq) exportin-5
KO
K14289
exportin-5
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121574997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cclu03016
]
121574997
03036 Chromosome and associated proteins [BR:
cclu03036
]
121574997
Transfer RNA biogenesis [BR:
cclu03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
121574997
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
121574997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
CD_NTase_C
Motif
Other DBs
NCBI-GeneID:
121574997
NCBI-ProteinID:
XP_041743680
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All DBs
Position
1:complement(80977193..81001736)
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AA seq
1220 aa
AA seq
DB search
MGEPVAEMCDQLIKAVNVMMDVESSQIYRLEALKFCEEFKEKCAFCVPCGLQLADKTQTA
VVRHFGLQILEHVIKFRWNNMPQKEKVQLKNCAMGLLSSGTYPILEEESYIKDVLSRIIV
EMIKREWPQHWPDMLKEMEALTSVGEAQTELVMLILLRLAEDVITFRTLPTQRRRDIQQT
LTQNMESIFSFLLAILQLHVDEYRKLKRIPGQELQAKAHCRVGVATLNTLAGYIDWVALA
NITSDNCRLLEILCLLLSETELQLEAAECLLIAISRKGKLEDRKPLMVLFDDVAMHYILS
AAQFANGAAICNKSSPTQPEGTGLVETHYIFLKRLCQVLCALGSQLCSLVGSDVEVEVPA
NLSKYTEAFLAFTTHPSQFLRSSTQITWGTLFRHEILSKDPVIIQMTIKYFRATMTNLVK
TGFPSRNDSPSCEYSRHDFDSDEDFNSFFNSFRAQQGEVVRNACRIVPLEAFQIAAEWLQ
YQISTPIDIGTTVSKTAEGLCSILSPAAVQWDAMTFFTESVVGKIFKNVEDEKLPVDQGV
ELLQAVLNYNTRDPLILSCVLTNVSVLFPFVTHRPHFLPQVLYKLFASITFEVVEESKAP
RTRAVKNVRRHACSSIIKMSRDYPQFILPCFDMMYNHVKKLFSNEDLLNLLEKCALMEAL
VLISNQFKDYNKQKNFLEELMGTVAARWTSDEMRHVLWDPALFLAFVGADQLVAEGTEHT
TGINRSRLSFCVYTILGVVKRARWPADLEEAKAGGFVVGYTPNGAPIYRNPCNTQVLALL
PNLLALIRTHNSLFLPENMCRLSETFSRAYDMIEVEKNVVLGLPQPALDIYDPPVYKTHL
ERMQGFFCTLYDNCYHTLGKAGLSLQQDFYTIEGLAEQIVGSAFVSLDNVPDHRLRTMIR
VFLKQLVVSCPQECYDSLLCPLLGPLFAYMLQRLHLRWQIINQRSTVSGEEDESCEENQE
MLEEQLVRLLTREVLDLLTHACIMKKVPEPAGNKEDVDEEEMMSTESQAVAASPAQPTGE
LTELGKCLLKHEDIYMTLLTISFTSLSWKDTSNCHRTASIVCWTLLRQVVGGNLLPEAVT
WFYTSVLKGLQMHGQHEICNSALTQLALLMYENLRPRYMELRDVMTQIPDINLEALDQYD
QRLLEPSSAQRLGEKKRKDQFKKLIAGTVGKALGQQFKKEVHIRNLPSLFKKPKPEKRDI
LETSESGALAALFSPVLDGI
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaacccgtggctgaaatgtgtgatcagctcatcaaagctgtgaacgtgatgatg
gacgtggaatctagccaaatatatcgtctggaggccctaaagttttgtgaagaattcaaa
gagaagtgtgccttctgtgtcccatgtgggctacagttagcagataaaactcaaacagca
gtggtgaggcactttggtctacagatactggagcacgtcataaagttcagatggaacaac
atgccacagaaggagaaagtccagctgaagaactgtgctatgggtctattgtcatctggc
acctatcctatcctggaggaggagagctacatcaaggatgttctctcgcggatcatagtg
gagatgatcaagagagaatggcctcagcactggcctgacatgctgaaggagatggaggca
ctcaccagcgtaggggaggcccagacagagctggtgatgttgatcctgctgcggctggcg
gaggacgtgatcaccttccggaccttgcccacccagcgtcgccgggacatccagcagacc
ctcacccagaacatggagagtatctttagcttcctgctcgccatcctgcagctccacgtc
gatgagtaccgcaaactgaaaagaatacctggccaagaattgcaggccaaggcccactgt
cgtgtaggcgtggctactctaaacaccctggcaggctacatagactgggtggccctggca
aacatcaccagtgacaactgtcgcctgctggagattctctgtctgctgctcagtgagaca
gagctgcagctggaggctgccgagtgcctgctcatcgccattagccgcaaggggaagctg
gaggacaggaaacccctcatggtgctgtttgacgacgtcgccatgcactacatcctgtct
gctgcacagtttgcaaatggagctgcaatatgcaacaaatcctctccaacacagccagag
gggacggggttggtggagacacactacatcttcctgaagaggctatgtcaggtcctgtgt
gccctgggcagccaactctgctcattagtgggttcagatgtggaggtagaggtacctgca
aaccttagcaagtacacagaagcattcctggccttcaccacacacccaagccagttcctt
aggtcttccacccagatcacgtggggaaccctgttcagacatgagattctctccaaggat
cctgttatcatccagatgaccatcaagtactttagagccaccatgaccaacctagtcaag
actggttttccttccaggaatgacagtcccagctgtgagtactcccgtcatgacttcgac
agtgatgaagacttcaactccttcttcaactcgttccgagcgcagcagggggaggtggtc
cggaatgcgtgtcgtattgtccccttggaggccttccagattgcagcagagtggctgcag
tatcagatcagtacgccgatcgacatcggaaccactgtgtctaagacggctgaggggctg
tgttctatcctgtctccggcagcggtccagtgggatgctatgaccttctttacagagagt
gttgtgggaaagatcttcaagaacgtggaggatgagaagttgcctgtagaccagggcgtt
gagctgctacaggcggtgttgaactacaataccagagaccctctcatcctgtcctgtgtc
ctcaccaacgtctccgtcctcttccccttcgtcacacaccgacctcacttcctgcctcag
gtcctctacaagctgtttgcctccatcacatttgaggtggtagaggagagcaaggcacca
cggacgcgtgcggtgaagaacgtcagaagacacgcctgctcctccatcatcaagatgtct
cgagactacccacaattcattcttccgtgctttgacatgatgtataaccacgtgaaaaag
ctgttctccaatgaggatctgttgaacctgctggagaagtgtgctttgatggaggccctg
gtcctcatcagtaaccagttcaaagactacaacaagcagaaaaacttcctggaggagcta
atgggcaccgtggctgctcgctggacctccgatgagatgaggcatgtgctgtgggatcct
gctctgttcctggccttcgttggtgctgatcagctggtggctgaaggcacagaacacaca
acgggcatcaacaggtcacggttgagtttctgtgtatacaccatcctgggggtggtgaag
agggcccgctggccagctgacctggaggaagcgaaggctgggggctttgtagtgggctac
acccctaatggagcccccatctacagaaacccctgcaacacccaggtcctggccctgctg
cccaacctgctcgccctcatcagaacccacaacagtctgttcctgccggagaacatgtgt
cgtctgagtgagacgttctccagggcctacgacatgatagaggtggagaagaacgtggtt
ctaggcctgcctcagccagccctggacatctatgaccctccagtgtataagactcatcta
gagcgcatgcagggattcttctgtaccctctacgacaactgttaccataccctggggaag
gcaggcctatcattgcagcaggacttctacaccatcgagggattggctgaacagattgtt
ggttctgccttcgtctccctcgacaacgtgcctgaccacagactccgcaccatgatccgg
gtgttcctgaagcagctggtggtgtcgtgtccacaggagtgctacgacagtctgctctgc
cccctgctgggccctctgttcgcctacatgctacagagactccatctcaggtggcagatc
atcaaccagaggagtactgtcagtggggaggaggacgagtcgtgtgaggagaatcaggag
atgcttgaggagcagctggttcggctgctcaccagagaggttctggacctgctcactcac
gcctgcataatgaaaaaagtgcctgagccagcagggaataaggaggatgtggatgaggag
gagatgatgtccactgagtcccaggcagtcgctgcctctccagcccagccaacaggcgaa
ctgacggagctggggaagtgtcttctcaaacacgaggacatctatatgaccttgttgacc
atctcattcacctcgctatcctggaaggacaccagtaattgtcaccgcactgcctccatc
gtgtgctggaccctgctacgacaggtcgtaggagggaaccttttgccagaggcggtcaca
tggttctataccagtgttctgaagggactgcagatgcatgggcagcatgagatctgcaac
tcagccctcacacaactggctctgcttatgtacgagaacctgcggccgcggtacatggag
ctaagagacgtgatgactcagatccccgacatcaatctggaggctctagaccagtacgac
cagcggctgctggagcccagctctgctcagaggttgggagagaagaagaggaaggaccag
ttcaagaagctcattgctggcactgtggggaaagctctgggccagcagttcaaaaaggag
gtacatatccgaaatcttccgtctctctttaagaagcccaagcctgagaaaagggacatt
ctggagaccagtgagagtggagcactagcagctctcttctccccagtactggacggcatc
tag
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integrated database retrieval system