Coregonus clupeaformis (lake whitefish): 121575017
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Entry
121575017 CDS
T08357
Symbol
cxxc1b
Name
(RefSeq) CXXC-type zinc finger protein 1b
KO
K14960
COMPASS component SPP1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121575017 (cxxc1b)
03036 Chromosome and associated proteins [BR:
cclu03036
]
121575017 (cxxc1b)
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
121575017 (cxxc1b)
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
121575017 (cxxc1b)
COMPASS/SET1 complex (yeast)
121575017 (cxxc1b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
Motif
Other DBs
NCBI-GeneID:
121575017
NCBI-ProteinID:
XP_041743712
LinkDB
All DBs
Position
10:31627662..31635857
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AA seq
571 aa
AA seq
DB search
MDSEVSDFEPAPGLESSMEGENAPVYCICRKPDINCFMIGCDNCNEWFHGNCINLTEKMA
KAIRQWYCLRCRDKNPSLEIKYRPKKSREKEAEGQREPERRFERQNSTPDYKSERRRGSK
VKRSARMCGECEPCLRTEDCATCDFCKDMKKFGGPNKIRQKCRFRQCDVRARKMLRVKDE
EFNLRERRDNSYHRRRRYSDDYDSEAELYEKYKAAGYDDNMPWLSDEDDGPPFSPVLRKK
AVKVKHVKRRENKFDKKKESRRHKQKQKHKDKVRHSDRGDARDGGGQRQCLGPSCVEAAR
ANSKYCSEECGMKLATNRLYEILPQRIQQWQQSPCIAEEQGKKQLERIRRDQQNARMRLT
DMEKRFHELEGIIAKAKQQVVQQDEETNEGDNEETDLLIFCVSCSHPINPKVALRHMERC
YAKYESQTSFGSMYPTKIEGATRLFCDVYNPQSKTYCKRLQVLCPEHSRDPKVPGDEVCG
CPLVRNVFEATGEYCRVSKRKCNKHYNWEKLRRAEVDLERVRVWYKLDELFEQERNVRTA
MTNRAGLLALMLHQTIQHDPLTTDLRCNKDR
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggacagtgaagtgtcagactttgagcctgcaccagggcttgagagcagtatggagggc
gagaatgcaccagtgtactgcatttgtcgaaaacctgacatcaattgcttcatgattggt
tgtgacaactgtaatgagtggtttcatggtaactgcatcaatctcacagagaagatggcc
aaagctatcaggcagtggtactgcctgcgatgccgagacaaaaacccatcattggagata
aaataccgtccaaagaagagccgtgaaaaagaggcagagggccagagagagccagagaga
agatttgaaagacagaacagcactccagattataaatctgaaaggcgccgtggatctaag
gttaagcgctctgctcgtatgtgtggggagtgtgagccctgcttgaggactgaggactgc
gccacatgcgacttctgcaaggacatgaagaaatttgggggtcccaacaaaataagacag
aagtgtcgatttaggcagtgtgatgtccgagccaggaaaatgttgcgtgtaaaggatgaa
gagtttaatttgcgtgaaaggcgggataattcctaccaccggcgaagacgatattcagac
gactacgatagtgaggcagaactctatgaaaagtacaaggcagcgggatacgacgacaac
atgccatggctcagtgatgaggatgacgggcctcccttcagccctgtcctgcgaaagaaa
gctgtgaaggtcaagcatgtgaagagacgggaaaataaatttgacaagaaaaaagagtca
cggcggcacaaacagaagcagaagcacaaggacaaagtcaggcacagcgataggggcgat
gccagggatggaggagggcagcgacagtgcctcgggcccagctgtgtggaagctgcacga
gccaactccaaatactgctcagaggaatgtggcatgaagctggctacaaaccggctctat
gagatcctccctcaacgtatccagcagtggcagcagagcccctgcatcgctgaggagcag
ggcaagaagcaactggagcggatccgaagggatcagcagaatgcacgcatgcgtctcacc
gacatggagaaacgcttccacgagctggagggcatcattgctaaggccaagcagcaggta
gtccagcaggatgaggagacgaatgaaggggacaatgaggaaacagacctgctgattttc
tgtgtgtcctgcagtcaccctatcaacccaaaggtggcactgcgacatatggagaggtgt
tatgctaagtatgagagccagacatctttcggttccatgtacccaacaaagatcgaagga
gcaacaagactcttctgcgacgtgtacaacccccagagcaagacctactgcaagaggctt
caggtcttgtgcccagaacattccagggacccaaaggtcccaggggatgaggtgtgcggc
tgtcctctggtccgtaatgtgtttgaggcaacaggcgaatactgcagggtttctaaacgc
aaatgtaataagcactacaactgggagaagctcaggagagctgaggtggacctggagcgt
gtcagagtgtggtacaagctggacgagctctttgagcaggagcgcaacgtcaggactgct
atgaccaacagggctggtctacttgctctcatgctgcaccaaaccattcagcacgacccc
ctgacaacggatctccgttgcaacaaggacagatag
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