Coregonus clupeaformis (lake whitefish): 121575031
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Entry
121575031 CDS
T08357
Name
(RefSeq) class E basic helix-loop-helix protein 40
KO
K03729
class B basic helix-loop-helix protein 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121575031
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
121575031
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GFIT
Motif
Pfam:
HLH
Hairy_orange
bHLH_NPAS4
YabA
DUF5365
Motif
Other DBs
NCBI-GeneID:
121575031
NCBI-ProteinID:
XP_041743735
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Position
10:complement(32355421..32359288)
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AA seq
402 aa
AA seq
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MERITNAQPPPCMAKHQSLEMADIQRMDIPKYMNKHRRGMKRGEDSKETNKLPHRLIEKK
RRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALSTLLEQQQQKIIALQN
GMQISDQSSVSSENSEEMFRSGFHVCAKEVLLYLANQGSSRDHLTPSQMISHLHKVASEV
LQGPFSPRPEEPTHKPIDSMEKPAGQLPKGNEGHPKNFVSVIQRTYPHGHGEQSGSDTDT
DSGYGGEHEKRDLKAKCSSYYGKEGELKYALAERMAGGGIKQEGDEPQAKRLKANYSEDE
SSSGQVVSSHHSYMSFSQYQTPLCVPFYLIPQEAASWPMMEKCWFPGGMPFLYPGMSGSA
ASLSPDKIPQNLVMSFRAGSPALYQTPKDSPALLQALKQAPP
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggagaggattacaaatgcgcaacctcctccttgtatggcaaaacaccagtcgctggag
atggcagacattcaaagaatggatatcccaaagtacatgaacaaacaccgaaggggaatg
aagcgcggggaagacagtaaggagacgaacaagttaccccaccgattgattgagaagaaa
agacgtgacagaatcaatgaatgcattgcccaactgaaggatttattgccagaacatctc
aaactcacaactctgggccatttggagaaagctgtggtgttggaactcaccctgaagcat
gtgaaagccctgagcactctcctggaacagcagcagcagaaaatcattgcactgcagaat
ggcatgcaaatcagtgatcagagcagtgttagctcagagaacagtgaggagatgttccgc
tctggcttccacgtctgtgctaaggaggtcctcctgtacctggctaaccaggggagcagc
agagaccacctgaccccctcccaaatgatcagccacctccacaaagtagcatcagaggtg
ctccagggtccattcagcccccggcccgaagagcccacccacaaacccatcgatagcatg
gagaagcctgctggtcagctgcctaagggcaatgagggtcaccccaagaactttgtgtct
gtcattcaaaggacatacccccacggacatggagagcagagtggcagtgacacagacaca
gacagcggctatggaggggaacacgagaaacgggacctcaaagccaaatgctcaagctac
tacggcaaggagggggagctcaagtacgctctggctgagaggatggcaggaggtggcatc
aagcaggagggtgatgagccccaggccaagaggttaaaagccaactactcagaggatgag
tcttcctctgggcaggtggttagcagccatcacagttacatgagcttctcccaataccag
accccactctgcgtgcccttctacctcatcccccaagaggctgcatcatggcccatgatg
gagaagtgctggttcccagggggcatgccctttttgtacccaggcatgagtggctcagca
gccagcttgtctccagataaaataccccaaaacctagtaatgtctttcagggcaggttcc
ccggcactctaccagacacccaaggactcaccagccctcctccaagctttaaagcaagcc
cccccatga
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