Coregonus clupeaformis (lake whitefish): 121575033
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Entry
121575033 CDS
T08357
Name
(RefSeq) leucine-rich repeat neuronal protein 1
KO
K24492
leucine-rich repeat neuronal protein 1/2/3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121575033
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
121575033
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
LRR_9
Ig_3
LRR_1
ig
LRR_EndoS
Ig_2
V-set
fn3
Pur_ac_phosph_N
LRRNT
LRRCT
LRR_Zer-1
Ig_C17orf99
Sp38
Ig_6
Peptidase_M73
Fn3_ELFN
Motif
Other DBs
NCBI-GeneID:
121575033
NCBI-ProteinID:
XP_041743745
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All DBs
Position
10:complement(32602267..32622893)
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AA seq
720 aa
AA seq
DB search
MARGRFIYCLLGQLFAGLILSSVGLSSIQRDNECPQQCVCEIRPWFTPQSTYREATTVDC
NDLRLTRIPGNLSSDTQVLLLQSNYIARTSEELEQLYNLTELDLSQNNFSSIRDVGLSNM
SQLTTLHLEENQITEMPDYCLQDLSNLQELYINHNQINIISPNALSGLHNLLRLHLNSNR
LKAIDSRWFESTPNLEILMIGENPVVGILDFNFKPLVNLRSLVLAGMDLTDIPGNAFVGL
DNLESLSFYDNKLVRVPQKALQKLPNLKFLDLNKNPVHKIKEGDLKNMLRLKELGINNMG
ELACIDRFALDNLPELTKLEATNNPKFSYVNRQAFRDLPALESLMLNNNALNALYQSTVD
FLPNLREISIHSNPMRCDCVIQWMSSNKTSIRFMEPLSMLCAMPAEVRGQHVREVLQQDS
AEQCLPMISHDTFPNHLNLDIGMTVDLDCRAMSQPEPEIYWVTPMGNKVMMDTMSDKYSL
SSEGTLRISHIQVEDSGRYTCVAQNAEGADTRVTAIRVNGTLLDSTQLMKVYVKQTESHS
ILVSWKVNSNVMTSNLKWSSATMKIDNPHITYTARVPVDVHEYNLTHLQPATEYEVCLTV
SNIHQQMQKSCVNVTTKHAAFAVEISDQGTNTALAAVMGTIFGIISLASMAVYIAKRWKR
KNYNHSLKKYMQKTSSIPLNELYPPLINLWEVDSEKDKEVSSSSETKPSQVDTTQSYYMW
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggctagagggaggtttatctactgtctactaggccagttgttcgctggcctgattctg
tcgtccgttggactatcctccatccagagagataatgagtgtccccagcagtgtgtgtgt
gagatccgaccctggttcaccccccagtccacctacagagaagccacgacggtggactgc
aacgacctccgtctcacacgcatcccaggcaacctgtccagtgacacgcaggtgctcctc
ctgcagagcaactacatcgccaggaccagtgaggagctggagcagctctacaacctgaca
gagctggacctgtctcagaacaacttcagcagcatccgcgacgtgggcctcagcaacatg
tctcagctcaccacccttcacctggaggagaaccagatcactgagatgcctgactactgc
ctgcaggacctcagcaacctgcaagagctctacatcaaccataaccagatcaacattatc
tcccccaatgccctctctggcctgcacaacctgctcaggctccatctcaactctaacagg
ctcaaggccatcgacagccgctggtttgagtccacgcccaacctggagatcctcatgatc
ggggaaaaccctgtcgttggcatcctggactttaacttcaagcctcttgtaaacctgagg
agcttggttctggctggaatggatttaacagacattcctggaaatgcttttgtgggacta
gacaacctagagagtctctccttctacgacaataagctagtcagagttcctcagaaagct
cttcagaaattacctaacctcaagttcttggacttgaacaaaaatcctgtgcacaaaatc
aaagagggggacttgaagaacatgctgaggctgaaagagctgggcataaacaacatgggg
gagctggcctgcattgaccgatttgccctcgataacctccctgagctcaccaagctggag
gccactaacaaccccaagttctcctacgtgaaccgccaggccttccgtgacctccctgcc
ctggagagcctcatgttgaacaacaatgcccttaacgccctctaccagtctaccgtggac
ttcctgcccaacctgcgtgagatcagcatccacagcaaccccatgcgatgcgactgcgtc
atccagtggatgagctccaacaagaccagcatccgcttcatggagcccctctccatgctc
tgtgccatgccagccgaggtcagagggcagcatgtgagggaggtgctccagcaggactca
gcggagcagtgcctgccgatgatctcccacgacacctttcccaaccacctgaacctggac
atcggcatgactgtggatctggattgccgagccatgtcccagcccgaaccggagatctac
tgggtcacgcccatggggaacaaggtgatgatggacaccatgtctgataagtacagcctc
agtagcgaaggaacgctgcgcatctctcacatccaggtggaggactctggcaggtacacc
tgtgtggcacaaaatgctgagggggcggacactcgggtgactgctattagggtgaatggt
actctcttagacagcacccagctgatgaaggtctacgtgaagcagactgagtcccactct
atcctggtctcctggaaggtgaactccaatgtcatgacctccaacctcaagtggtcatct
gccaccatgaagatagacaacccccacatcacctacacagccagggtcccagtggatgtc
catgagtataacctcacacacctacagcctgccaccgagtacgaggtgtgtctcaccgtc
tccaacatccaccagcagatgcaaaagtcctgtgtcaacgtcacgacgaagcacgcagcc
tttgctgtggagatatctgaccaaggcactaacaccgctctcgcagctgtcatgggaacc
atattcggcatcatcagcctggcttctatggctgtgtacattgccaagaggtggaagagg
aaaaactacaatcactccctgaaaaagtacatgcagaaaacatcctccatcccccttaat
gagctctaccctcccctcatcaacctgtgggaggtggacagtgagaaggacaaagaggtg
tcctcctcctcagagaccaaacccagccaagtggacactacacagagctactatatgtgg
tga
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