Coregonus clupeaformis (lake whitefish): 121575113
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Entry
121575113 CDS
T08357
Name
(RefSeq) TBC1 domain family member 20 isoform X1
KO
K20372
TBC1 domain family member 20
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121575113
Membrane trafficking [BR:
cclu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
121575113
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3325
Motif
Other DBs
NCBI-GeneID:
121575113
NCBI-ProteinID:
XP_041743902
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Position
10:41649619..41661385
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AA seq
411 aa
AA seq
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MKRSRSVGASSPLNGIGKQDRDSRRKRKLAEISQALNVTPVDVAVLRRMAISEGGLLTDE
IRCKVWPWLLNVPTNILPEKPEEVERENNKDYNQVLLDVQRSLRRFPPGMPDEQREGLQE
ELIDIILRVLGRNTQLHYYQGYHDIVVTFLLVLGERLATALVEKLSTHHLSLSLLFLYCR
DFMDPTMDNTKHILNYLMPIIERVNPEVHDFMQQAEVGTIFALSWLITWFGHVLSDFRHV
VRLYDFFLACHPLMPIYFAAVIVQYREDEVLDCECDMASVHHLLSQIPQDLPYETLISRA
GDLFVQFPPSELAREAAQQYSQQMAASTFKDFDLTSEQQRPDKVLRRRRREKQALEGAAA
GAMVATAQPTAARRFVRLAVMGLTVALGAAALTLVNTALEWVPKLDLHLFP
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagatctagaagtgttggtgcgtcttcacctttgaatgggattggaaaacaagat
agggactcccggaggaagaggaagttggcggagatctctcaggccctgaacgtgacgccg
gttgatgtggcagtgctgaggaggatggccatcagcgagggggggctgctcactgatgag
atccgctgtaaagtgtggccatggctgctcaacgtgcccaccaacatcctgcctgagaaa
ccagaggaagtagagcgggagaataataaggactataaccaggtgctgttggatgtccag
cgttcccttcgaagattccctcctggcatgccagacgagcagcgtgagggcctccaggag
gagctgattgacatcatcctgcgtgtgctgggaaggaacacccagctgcactactaccag
ggctaccatgacatcgtggtcaccttcctgctggtgctgggcgagcggcttgctaccgct
ctagtagagaaactctccacacaccacctcagtttgtctctcctgttcctttactgcagg
gactttatggacccaaccatggacaacactaaacacatacttaactatctgatgccaatc
atcgagagggtcaacccagaggtgcatgacttcatgcagcaggcggaggtgggcaccatc
tttgcccttagctggctcatcacctggtttggccacgtcctgtcagatttccgacacgtc
gtacggttgtatgacttcttcctggcctgccatcccctgatgccaatctactttgctgct
gtgattgtgcagtaccgggaggatgaggtgttggactgtgagtgtgacatggcgtcggta
caccacctcctgtctcagatcccccaggatctgccctacgagacgctcatcagccgtgca
ggagacctctttgtccagttccccccctccgagctggccagggaggctgcccagcagtac
agtcaacagatggcggcctccacctttaaagactttgatctgacctcggagcagcagcgg
ccggacaaggtgctgcggaggcggcggagggagaagcaggcgctggagggagctgctgca
ggtgctatggtggcaacggcccaaccaaccgcggctcggcgcttcgtccgactggccgtc
atggggctcactgtggccctgggggcagccgccctcaccctggtcaacacggccctggag
tgggtgcccaaactggacctgcacctcttcccctga
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