Coregonus clupeaformis (lake whitefish): 121575123
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Entry
121575123 CDS
T08357
Name
(RefSeq) nuclear receptor subfamily 4 group A member 1-like
KO
K04465
nuclear receptor subfamily 4 group A member 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121575123
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121575123
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cclu03310
]
121575123
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys4 nerve growth factor IB-like
121575123
Nuclear receptors [BR:
cclu03310
]
4. Nerve growth factor IB like
4A. Nerve growth factor IB like receptor
121575123
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
121575123
NCBI-ProteinID:
XP_045078964
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Position
10:41355825..41364336
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AA seq
591 aa
AA seq
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MPCVQTQYGTVPYDNNYFSSEFLNPELSAKLAMDIGAQQDQLTASSLPSINTLVGSGYVG
EFDAYSCQITTSTSASNAPSGHSAGGASSPQAQHSAFKLDDIQVYSCYPGSFALSYLEET
LSSCGSDYYGSPASAAASPPTPGFQSQPGPVWDSPFSPYSPDPGCWVADKSGLAQQPSFF
TFNPTVDQHSPLGQHQGPQQGEDDPFFQPSQRNASQLHYAPLSLDQGSMDSPGLMERPMS
SPKSCSPGANEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKDCPVDK
RRRNRCQFCRFQKCLVVGMVKEVVRTDSLKGRRGRLPSKAKTVPESVSTTPPVNIIASLV
RAHIDSNPAIGKLDYSKYQETVASLSEKEDANDIQQFYDLLTGTMDVIRKWAEIIPGFTA
FCPEDQELLLESAFVELFILRLAYRSSPEKDKLIFCNGVVLHRMQCVRGFGDWIDSIMDF
SQSLHRMNLDVSSFACLAALVIITDRHGLKEPKRVEEFQNRLITCLRDHVTSSGSDAGRP
QPNFLSRLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPPIVDKIFMDTLPF
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgccctgtgttcaaactcagtatggaactgtgccctacgacaacaactacttcagctct
gagttcctgaaccccgaactcagtgctaagctggccatggacatcggtgcccagcaggac
cagctcaccgcctcctccctccccagcatcaacaccctggtgggcagcggctacgtgggc
gagtttgacgcctactcctgccagatcaccacctccacctctgcctccaacgccccctcc
ggccactcagccggcggcgcctccagccctcaggctcagcactcagcctttaaactggac
gacatccaggtatacagctgctacccgggctccttcgccctcagctacctcgaagagacg
ctgtcctcctgcggctccgattactacggcagccccgcatcagccgccgcctccccaccc
accccgggcttccagagtcagcctggcccagtctgggactcacccttcagcccctactcc
ccagaccctgggtgctgggtggccgataagtcaggcctggctcagcagccctccttcttc
accttcaaccccaccgtagatcagcactcccccctggggcagcaccagggcccccagcag
ggtgaggatgaccctttcttccagccctcccagaggaatgcctcccagctccattacgcc
cccttgtccctggaccaggggtccatggacagccccgggctcatggagaggcccatgtcg
tcccctaagtcctgcagccccggggccaacgagggtcgctgtgcagtgtgtggggacaac
gcctcctgtcagcactacggggtccgcacctgtgagggctgcaagggcttctttaagcga
actgtacagaagaatgctaaatatgtgtgtctagctaacaaagactgtccagtagacaag
cggcggaggaaccgctgccaattctgccgtttccagaagtgcctggtggtgggaatggtg
aaagaagtcgtccgcacagacagcctgaaaggtcgcaggggtcgtctgccctctaaagcc
aagactgtgccggagtcagtgtccaccaccccacccgtcaacatcatcgcctctcttgtc
agggctcacatagactccaaccccgccattggaaagctggactactccaagtaccaggag
acagtggctagcctgtcagagaaagaggatgccaatgacatccagcagttctacgacctg
ctgacaggcaccatggatgtgatccggaaatgggccgagatcatcccgggattcaccgcc
ttctgcccggaagaccaagagctgctcctggaatctgctttcgtggaactcttcatcctc
cggctagcatacaggtcgagtcctgagaaagacaagctgatcttctgcaacggcgtggta
cttcaccgtatgcagtgtgtgcgaggctttggcgactggatcgactccattatggacttc
tcccagagcctccaccgcatgaacctggacgtgtcctcattcgcctgcctcgcagcactc
gtcatcatcacagatcgccatggccttaaagagcccaaacgggtggaggagttccagaac
cgcctcatcacctgtctgagggaccatgtgaccagcagtggctccgatgcggggcggccc
cagcccaacttcctgtcccgactgctggggaagctccctgagctgcgcaccctctgcacc
cagggcctgcagcgcatcttctacttgaagctggaggacctggtccccccaccacccatc
gtagacaaaatcttcatggataccttacctttctga
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