KEGG   Coregonus clupeaformis (lake whitefish): 121575137
Entry
121575137         CDS       T08357                                 
Name
(RefSeq) lysine-specific demethylase 5B-B-like isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cclu01009]
    121575137
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cclu03036]
    121575137
Enzymes [BR:cclu01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     121575137
Protein phosphatases and associated proteins [BR:cclu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     121575137
Chromosome and associated proteins [BR:cclu03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    121575137
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID PHD zf-C5HC2 JmjN PHD-1st_NSD PHD_4
Other DBs
NCBI-GeneID: 121575137
NCBI-ProteinID: XP_041743955
LinkDB
Position
10:complement(40937211..40985994)
AA seq 1501 aa
MTQPRPNEFIAPPECPVFEPSWEEFADPFAYINKIRPIAEKTGICKVRPPKGWQPPFACD
VDSLHFTPRIQRLNELEAQTRVKLNFLDQIAKFWELQGCTLKIPHVERKILDLYQLNKLV
NDEGGFDAVCRERRWSKIALKMGFAPGKAIGSHLRSHYERILYPYNLFQTGANLLKPTLT
NDTKDTDYIPHDLPQRQSVQPLETCSIARRAKRMRAEEGCMKTVTEEDCENRPNLRRRMG
SYVAKPEPQPVKELPVQVKQEATEHEEPITSDKENVLTKKNDPTSPQVDQYMCLVCGSGS
EEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLAQECGKPQVAFGFEQAGRDYSL
RTFGDMADSFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFP
IRGGRFQVSPEDEDYLSSGWNLNNMPVIDSSVLTHITADICGMKLPWLYVGMCFSSFCWH
IEDHWSYSINYLHWGEPKTWYGAPGYAAEKLEGVMMKLAPELFESQPDLLHQLVTIMNPN
TLMNHGVPIYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTMDWMPMGRMCVDHYR
RLNRYCVFSHDEMVCKMASKADTTMDVALASAVQRDMTVMLQEEDKQRDKVRKMGVQRSQ
QAEYDLLPDEERQCSKCRTTCYLSALTCPCRPGQLVCLHHAHELCSCPPSNLTLNYRFTM
AELFPMMEAVTVRAESYTDWVSHVSDILEAKQDKKSGLEELRSLVEEAEVKQFPPSDLLR
QLRTVTLDAEKCAGVAQQLLIGKRQTRYRSGGRKSQSQNLLTVEELRSFVRQLHNLPCSI
RQAPLLKDLLTRVDDFQQSSKQLLSDEAPSPAALQGLLDVSLGLDVALPQLALLRERLEQ
ARWLDGVKEASGRPHSLCLDTMRRLIDQGVGLAPHASVERAMARLQELLTMSEHWEERAC
RLMEARPRHCVETLVAALQEVDSIPAYLPNCLLLKDTVDQAKDWLQEAETLQLGSRIPVL
DTLTDLVFRAKAIPVWLDPLARLDSLVSDVQAWKESAAKTFLMKNSPYSLLEVLCPRCEA
GTGPQKSKSKRAKDAAQCSKRNGARLDCLSDVERALSESKDSASAMATLAEVRQKEMESL
LALRASNESKLLPAGDCGALRVCVCHKAPSGAMLQCELCRDAFHRDCVLGSNQDSFPNQA
WLCPPCQLSEKPPLDRVLPLLASLQRIRVRLPEGDALRFLIERTVRWQHRVQQTSAEGEL
GEGVAVMTSHQRWASSSPTWALNQETNSTSFYTEHQCIPLQGLSPELEELMVEGFLLQVT
LPETQQLYRSLLIRLDPLLQHHHTDSPFPQHSAEQDQHQHNSQGGSPPHNQNGVACPKKE
AVNGKRTKRHIEEEGPERKDKAKKPRKKKPKMNKERSQESKGTSSPTATHSDLSLSDSDE
DFTLCAAPWCREPEGKQVNWVQCDGSCQQWFHQVCVGVSAEQAEKEDYICISCTQPDHTR
E
NT seq 4506 nt   +upstreamnt  +downstreamnt
atgacccagcctcggcccaacgagtttattgctccaccagagtgtcctgtttttgagccc
agttgggaggaatttgccgatccatttgcgtatatcaacaaaatacggcctattgcagag
aaaacgggcatctgcaaggtccgaccgccgaagggatggcagccaccgtttgcatgtgac
gtggatagtctgcacttcactccccgtatccagagacttaatgaattggaggctcaaacc
agagtcaagctcaacttcctggatcaaatcgcaaagttctgggagctacaagggtgcacc
ctgaaaatccctcatgtggaaagaaagattctggacctataccaactcaacaagttggtg
aacgatgaggggggttttgacgcggtttgcagagagagacgctggtctaagatagccctc
aagatgggctttgctccaggcaaggccataggctctcatctgcgctcccactatgagagg
atcctttacccctacaacctgttccagactggagccaaccttctgaagcccaccctgacc
aacgacacaaaggacaccgactacatcccccatgaccttccccagcgacagtctgttcag
cccctggagacctgcagcatcgcccgcagagccaagcgcatgagagctgaggaaggctgt
atgaagacggtgaccgaggaggactgtgagaaccggcccaacctgaggaggaggatgggc
tcctacgtggccaagccagagccacagcctgtgaaagagttacctgttcaggtgaaacag
gaagccacagagcatgaggagccaataacaagtgacaaagaaaacgtgctgactaagaaa
aacgaccccacatctcctcaggtggaccagtacatgtgtctggtgtgtggcagcgggagc
gaagaggaccgcctgctgctttgtgacggctgtgacgacagctaccacaccttctgtctg
atcccgcccctccacgatgtccccaaaggagactggaggtgccccaaatgcctggctcag
gagtgtggcaaacctcaggtagcctttggtttcgagcaggctgggagggactactcccta
cgcacttttggggacatggcagactccttcaagtcagactatttcaacatgccggttcat
atggttccaacagagctagtggagaaggagttctggcgcttggtcagcaccatcgaggag
gacgtcactgtggagtatggggctgacattgcctccaaggagttcgggagtggcttcccc
atcagaggcggacgattccaagtctcccctgaggatgaggattacctgagcagtggctgg
aacctgaacaacatgcccgtgatagactcctcggtgctgactcacattacggctgacatc
tgtgggatgaagttaccctggctctacgtgggcatgtgcttctcctccttctgctggcac
attgaggaccactggagctactccatcaactacctgcactggggagagcccaagacatgg
tacggggctccaggatatgctgcagagaagctggagggggtgatgatgaaactggccccc
gagctgtttgagtcccagcctgacctcctgcaccagctggtcaccatcatgaaccccaac
acactcatgaaccacggcgtccccatttatcgcaccaatcagtgcgctggcgagtttgtc
atcaccttccccagagcctaccatagtggatttaaccagggattcaacttcgctgaggct
gtcaacttttgcaccatggactggatgcccatgggccgcatgtgtgtggaccactatcgg
cggctgaataggtactgcgtcttctcccacgacgagatggtctgcaagatggcgtccaag
gcggacaccaccatggatgtggccctggcctcggctgtgcagagggacatgaccgtcatg
ctccaggaggaagacaagcagagggacaaagtccgcaagatgggcgtgcagcgttcccag
caggcggagtatgacctgctgccagacgaggagcgccagtgttccaagtgcaggaccacc
tgctacctgtctgccctcacctgtccctgcagacccggccagctggtgtgtctgcaccac
gcccacgaactctgctcctgcccccccagcaacctcacactcaactacaggtttaccatg
gctgagctcttccccatgatggaagcagtcacggtgcgtgcagagtcctacacagactgg
gtctcccatgtcagtgacatcctggaggccaaacaagacaagaaaagtggcttggaagag
ctgcgctccctggtggaggaggcggaggtgaagcagttccctccgagtgacctcctgcgg
cagctccgcacagtcaccttggatgctgagaagtgtgctggggtggcccagcagctactc
attgggaagaggcagaccaggtatcgttcaggtggaaggaagtcccagagccagaatctg
ctaacggtggaggagctcaggtcgtttgtaaggcagctgcacaacctgccctgcagcatc
cgccaggcccccttactcaaggacctgctgacccgcgtggatgacttccagcagagcagt
aagcagctcctctctgacgaggcccccagcccagcggcgctgcagggcctgctggacgtg
agcttgggcctggatgtggcgcttccccagctggccctgctcagggagaggctggagcag
gctcgctggctggacggggttaaggaagcaagcggccggccccacagcctgtgtctggac
accatgcggaggctgatagaccagggggtgggcctggccccgcatgcctcggtggagagg
gctatggcccgcctgcaggagctgctcaccatgtctgagcactgggaggagcgggcatgc
cgcctcatggaggccaggccccgtcactgtgtggaaactcttgtggcagctctgcaggag
gtggatagtatccctgcctatcttcccaactgtctgctgctgaaggacacagtggaccag
gctaaagactggcttcaggaggcagagaccttacagctgggaagccgtatccctgtgctg
gataccctgaccgacctggtgttccgggccaaggccatcccagtctggctggaccccctg
gctcgactggattccctggtgtctgacgtgcaggcctggaaggagagcgccgccaagacc
tttctaatgaagaactccccttactccctgctggaggtgctgtgcccccggtgtgaggct
gggacggggcctcagaagtccaagtctaaaagggcaaaagatgcggcccagtgcagcaag
agaaatggcgccaggctggactgcctgagcgatgtggagagggccctctcagagagcaag
gactccgcctctgctatggccactctggccgaggtacgtcagaaggagatggagagtctg
ctggcccttagggcctccaacgagtccaagctcctcccggccggcgactgcggggcattg
agggtgtgcgtgtgccacaaggctccgtcaggcgccatgctgcagtgcgagctctgccgt
gacgccttccaccgcgactgcgtcttaggctctaaccaggactccttccccaaccaggcc
tggctgtgccccccgtgccaactctcagagaaaccccctctggaccgggtgcttcccctg
ctggcctccctgcagcgcatccgggtgcggctgcctgagggtgacgccctacgcttcctc
atcgagaggacggtccgctggcagcaccgcgtgcagcagacctccgccgagggggagctg
ggggagggggtggccgtgatgacgtcacatcagcgctgggcctcgtccagtcccacatgg
gctctgaatcaggaaacaaacagcacatcgttctacacggagcaccagtgcattcctctg
cagggactgagccctgagctggaggagttgatggtggagggcttcctgctgcaggtgact
ctgcctgagacccagcagctgtacaggtccctcctcattagactggaccccctcctccaa
caccaccacacagacagcccctttccacagcacagcgcagagcaggaccaacaccagcac
aactctcagggagggagcccccctcacaaccagaacggagtagcctgtcccaaaaaggag
gctgtgaacggaaagaggaccaagcggcacatagaggaggagggccccgagcgcaaggac
aaagccaagaagccccgcaagaagaagcccaagatgaacaaggagaggagccaggagtcc
aaggggacctcttcacccaccgccacccactctgacctctccctgtcggactcggatgaa
gacttcaccctgtgcgctgcaccatggtgccgagagccagaggggaaacaggtgaactgg
gtccagtgtgacggaagctgccagcagtggttccatcaggtctgcgtgggagtgtctgca
gagcaggctgaaaaagaggactacatctgtatcagctgcacacagccagaccacaccagg
gagtga

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