Coregonus clupeaformis (lake whitefish): 121575166
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Entry
121575166 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1-like
KO
K17848
Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04068
FoxO signaling pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
121575166
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121575166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121575166
Membrane trafficking [BR:
cclu04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
121575166
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ArfGap
Ras
PH
Ank
Ank_2
PH_6
SOS1_NGEF_PH
Ank_4
PH_4
Motif
Other DBs
NCBI-GeneID:
121575166
NCBI-ProteinID:
XP_041744010
LinkDB
All DBs
Position
10:complement(39709875..39778687)
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AA seq
1237 aa
AA seq
DB search
MSHAGTLPRRTTYLISLTLVKVEAVGGDGGVIRPQPQLALALARGGVGGPGYEEDEELSR
TTEDEGGHSCAVGEGEGHTEMEEEQQEDVSFEGAVQERGKPEMREKEIRGPGFSKDITLV
IKNKESPILPKNVKDQVKGLAGVSSVTSEGGLRREGTRPKTELYREPPMLFPMGEEGMGD
PSSTLCRGSVPITVPPRLTHRPEVLMRSHAGGGAVSRRELREANQSMPPSAKSLDRKDNR
IGDRSPMTGAAAALGPYRASWADSDGRTTLRHQGVNVGGGFTGVVTRESPRGDRLKTGST
SLPAQPTTQVSKPARKGKSRTLDNSDLHSLSEDLKKGKDGKCQGQGGTTQRTRDRKMLKF
ISGIFTKSTPAPPSSNTTPAIYTPIQRGSSEEEAACTNSQEWTFSPTVQELRLGVLGALC
SGKSALVHRHMTGSYLPLENPDEGRYKKEVLVDGNSHMLLIREETGPPDAQMASWVDGVI
LVFSLENEASFQEVYRNYSELGTHRNIAEIPFIVVGTQDKINSTNPRVIEDARARQLCSD
VRRCTYYETCATYGLNVNRVFTEAAHKIMAVKKQAALLASCKSLPNSPSHSGGSTPVSGV
FPGQASNGGQSSDYSSSLPSTPVISHKEIGGAAGGERLGSATPGSVRSAPRRRTGSRFTG
RRGSDSERRSTDSKIGDLGSGRSIPIKQSILLKRSGNSLNKEWKKKYVTLSNNGMLSYHS
SVNDYMQNAHGKEMDMLRVTVKVPGKRPPRAGAVPSCGPPPGLNGLVKDVQGPEGASAVP
GSGSNLLPVEEGAGGGLSEGCRGVQRCPSTVSYKAQSVDTAIEGVSSPSSSKDTGPASPM
VDRKKHRRKKSMNQKGDTTIGQSDPKRKMWKLKSFGSLRNINKTGNEDEDNFDFLIVSST
GQTWHFEAQSVEERDAWVTAIESQILASLQLCESSKNKARKNSQSEAVALQAIRNAKGNS
LCVDCEAPNPTWASLNLGALICIECSGIHRNLGTHLSRVRSLDLDDLPRELTLVLGAIGN
HLANSIWEGRTLGRRKPTPDATREERESWIRAKYEQRLFVAPLVPPSPSMSHSQGSEVNT
LSARLLVAVMERDLPRLLLLLAHSTKDDINAPLRPGGHLSPHPPAASPSSPMGGSPLLPH
SALHAACQLADVIMTQLLVWYGSDVRCRDAQGQTALTWARYAGSQECADILLQYGCPNEP
APSVATTPSSVATTPSLSRKSSAASLSRSISSRRAVS
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgagccacgcaggcaccctaccgagacgcaccacctacctcatctccctcaccctggtc
aaggtcgaagcggtagggggtgatggaggggtcatcaggccccagccacagctggccctt
gccctggcgagaggaggtgtggggggccctgggtatgaggaggatgaggagctgagtagg
accactgaggatgagggaggacactcgtgtgccgtgggggagggagaggggcacacagaa
atggaggaagagcagcaggaagatgtcagctttgagggggctgttcaggagagggggaag
cctgagatgagggagaaagagattcgtggtccaggcttctcgaaagatatcacgttggtg
attaagaacaaggagtctcccatcttaccgaagaacgtgaaagaccaagtgaaggggctt
gcaggggtgtcaagtgtcacctcagagggagggctgaggagagagggaacccgtcctaaa
acagagctctacagggagccccccatgctgtttccaatgggcgaggaggggatgggcgac
ccaagcagcaccctctgccggggcagcgtgcccatcactgtcccgcccaggctcactcat
cgacccgaggtcctgatgaggtcacatgccgggggtggggctgtaagccggcgggagttg
agggaagccaatcaaagtatgcctccatccgccaagagtctggaccgcaaagacaaccgt
ataggggatcggtcgcctatgacaggtgctgcggccgccctagggccttaccgagcgtcc
tgggcagacagtgatggcaggaccaccctccgtcaccagggagtcaacgtggggggaggg
tttacaggcgtggtgaccagggaaagcccccgaggggacaggctgaagacaggctccacc
tccctgccagcccaacccaccactcaggtgtccaagccggcaaggaagggcaagagccgt
accctggacaacagtgacctgcactctctctctgaggacctgaagaaggggaaggatggc
aagtgccagggtcaggggggaaccacccagcgcacccgcgaccgcaagatgctcaagttc
atcagtgggatcttcactaagagtacacctgcgcctcccagctccaacacaacgcccgct
atctatacacccatacagaggggttctagtgaggaggaagcggcgtgcactaacagtcaa
gaatggaccttcagtccaaccgtccaagagctccgtttgggggtgttgggagctctctgc
agtggaaagtcagccttggtccacagacacatgactgggagctacctccccctggagaac
ccagatgagggcaggtataagaaggaggtgctggttgatggtaacagtcacatgttgctg
atcagggaggagacaggacccccagatgcacagatggctagctgggtggacggggtcatc
ctggtcttcagtctggagaacgaggccagtttccaggaagtgtacaggaactacagcgag
ctgggcactcaccgcaacatcgctgagatccccttcatagtcgtgggcacccaagataaa
atcaatagcaccaaccctcgggtgatagaggacgccagggccagacagctgtgttcagac
gtgaggcgctgtacctactacgagacctgcgctacctacggcctcaacgttaaccgcgtc
ttcaccgaggctgcccacaagatcatggcagtgaagaagcaggcagctctactggcctcc
tgtaaatccctgcccaactctcccagtcactctggaggctctaccccagtgtcaggagtc
tttcctggacaggccagtaacggtggtcagagcagtgactactcgtcctccctgccctcc
accccagtgatcagtcataaggagatcggtggggcagcagggggggagaggctgggcagt
gccaccccagggtctgtccgcagcgccccccggcgacgcactggctcccgcttcacgggc
cgaaggggcagtgactcagagaggaggagtacggacagtaagataggagacctgggcagt
ggacgctccatccccattaaacagagtatcctactgaagcgcagtggcaactccctcaac
aaggaatggaagaagaaatatgtcacgctgtccaacaacggcatgctctcctatcactca
agcgtcaatgactacatgcagaatgcccatgggaaggaaatggacatgctgcgggtgacg
gtgaaggtgccagggaaacgcccgccccgtgctggtgccgtcccttcctgtggccctccg
cccggcctcaacggcctggtcaaagatgtccaggggcctgagggggccagtgcagtccct
ggtagtggcagtaacctcctgccggtagaggagggggcaggaggagggttgtcagagggg
tgcagaggggtgcagcgctgcccctctactgtctcctacaaggcccaaagtgtggacact
gccatcgagggtgtgtccagcccctcttcctctaaagacacaggccccgcctccccgatg
gttgacaggaagaagcatcgcaggaagaagagcatgaaccagaaaggagacacaacaatt
ggccaatcagatccaaagcgcaaaatgtggaaactaaaaagttttggtagtttaagaaac
ataaacaagacaggtaatgaggacgaggataactttgacttccttatcgtgtcgagcacg
ggccagacgtggcacttcgaggcccagagtgtggaggaaagggacgcctgggtgactgcc
atcgagagccagatcctggccagcctgcagctgtgtgagagcagcaagaataaggctcgt
aagaacagccagagtgaagctgtggcgctgcaggctatccgtaatgccaagggcaacagc
ctctgtgtggactgtgaagcacctaacccaacgtgggccagtctgaacctgggggctctg
atctgcattgagtgttcagggatccacaggaacctgggcacccacctgtcccgtgtccgc
tctctggacctggacgacctgcccagagaactcaccctggtgctgggtgccattggcaac
cacctggccaacagcatctgggagggacgcacgctgggccgccggaaacccacacccgac
gccacccgagaggagcgggagtcgtggatccgggccaagtatgagcagaggctgtttgtg
gctccgctggtcccgccctccccctccatgtcccacagccaggggtcagaagtcaacacg
ctgtcggcccgtctgctggtggccgtgatggagagggacctcccccgcctgctcctcctc
ctagcccacagcaccaaggacgacattaacgcccccctccgcccagggggtcacctctct
cctcacccccctgctgcgtcccccagctctcccatggggggatccccactgctgccccac
tcagcgctccacgccgcctgccagctcgccgacgtgatcatgacccagctgctggtctgg
tatggcagtgatgtgaggtgtcgggacgcccaggggcagacagccctcacgtgggcgcgt
tacgctggcagtcaggagtgtgccgacatcctcctgcagtacggctgccccaacgagccg
gccccctcggttgccacgacgcccagctctgtcgccacgacacccagcctttcccgcaag
agcagcgccgccagcctcagccgcagcatcagctccagaagagcagtgtcttaa
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