Coregonus clupeaformis (lake whitefish): 121575176
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Entry
121575176 CDS
T08357
Name
(RefSeq) homeobox protein Hox-C4a-like
KO
K09304
homeobox protein HoxA/B/C/D4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121575176
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
121575176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF2209
Motif
Other DBs
NCBI-GeneID:
121575176
NCBI-ProteinID:
XP_041744061
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Position
10:39299323..39302054
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AA seq
274 aa
AA seq
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MIMSSYLMDSNYIDPKFPPCEEYSQNSYIPEHSPEYYSRTRDIGYQHPHQELYPPRVTYQ
ERPYNCVSIPEPEPQTGHGLTHSGNLLAGKVQTAPREPLPLLPTSPTSPPTAPPAYIQAT
PEHPISSTSAKQPVVYPWMKKIHVSTANPNYNGADSKRSRTAYTRQQVLELEKEFHYNRY
LTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDHRLPNTKVRSSSNASAISGSTTASTT
ASTLPRAVGSNTVPASEELSRVSVVERNQDITRL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgatcatgagctcgtatttgatggactctaactacatcgatccgaaatttcctccttgc
gaggaatattcacaaaatagctacatcccagaacacagccctgaatactacagccgcacg
agagacattggctaccagcatccccaccaggagttgtatcctccgcgagtgacctaccag
gagcgcccgtataactgtgtaagcatccccgagcccgagccccagactggccatgggctt
acacactcggggaatctgctcgcagggaaggtacagacagctccacgtgagcccttgcca
ctgttacccacatcccctacgtccccaccgactgcgccgcctgcctacatccaagccacc
ccggagcatcccatcagctctacctcggctaagcagcctgtagtgtacccatggatgaag
aaaatccacgtcagtaccgcgaatcccaattacaatggagcagactcaaagcggtccagg
actgcttacactcgccagcaggtcttagaactggagaaggagttccactataaccgctac
ctaactcggcgaagacgcatcgagattgcccacacactggttctctccgagcgccagatc
aaaatttggtttcagaaccgaaggatgaagtggaaaaaagaccataggctacccaacacg
aaagtgagatcctcttccaacgctagcgcgatctccgggtccaccacagcgtcaacaaca
gccagcactctccctcgtgcggtgggctctaacaccgtgccagcttccgaggaactctct
cgagtgtcggtagtcgaacgaaaccaggatattacaaggttatag
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