Coregonus clupeaformis (lake whitefish): 121575196
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Entry
121575196 CDS
T08357
Name
(RefSeq) leucine-rich repeat neuronal protein 1-like
KO
K24492
leucine-rich repeat neuronal protein 1/2/3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121575196
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
121575196
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Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_9
ig
LRR_1
V-set
LRR_EndoS
Ig_2
fn3
LRRCT
Pur_ac_phosph_N
LRRNT
LRR_NXF1-5
Sp38
Motif
Other DBs
NCBI-GeneID:
121575196
NCBI-ProteinID:
XP_045078792
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All DBs
Position
10:14552847..14588928
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AA seq
712 aa
AA seq
DB search
MAPSPLPWPLLTWLCVGLLLHLVRGEECPRLCVCEVRPWFTPQSTYREAATVDCNDLRLT
HIPSNLSSDTQVLLLQSNSITHTSGELEALFNLTELDLSQNNFSSMEAVGLANMNQLTTL
HLEENQISQLPDHCLQDLSNLQELYINHNQISTIAPGAFSGLRSLLRLHLNSNRLRVIDN
RWFEATPNLEILMIGENPVIGILDMNFKPLGSLRSLVLACMDLTDIPGNALVGLDNLESL
SFYDNKMVRVPQLALQKVPNLKFLDLNKNPVHKIHEGDFRNMLRLKELGINNMADLVSID
RYALDNLPELTKLEATNNPKLSYVHRTAFRDMSSLESLMLNNNALNAVYQHTVEALPNLR
EISLHSNPLRCNCVIQWMRSNRTSVRFMEPLAMLCTSPPELRGQRVREVKLQDSPEQCLP
FISHDTFPSHLSLELGMSVSLDCRAIAEPDPEIYWVSPMGSKITVDTMSERYHLSSEGTL
RLSHVQVEDSGRYTCVAQNTEGADTRVTTIRVNGTLLDSAEVMKIYVKQTESHSILVSWK
INSNVMTSNLKWASATMKIDNPHITYTARVPVDVHEYNLTHLQPATEYEVCLTVSNIHLQ
THKSCVNVTTRSVTFTLDVLDQRPSAALLTVMATMLAFLSLATVGVYVTRRWKRKNYHHS
LKKYMQKTSSIPLNELYPPLINLWEADSEKDKEGGTERKPSAVDTTRSYYMW
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggctccaagccccctcccctggcccctactgacatggctgtgtgtggggctgctgttg
cacctggtgaggggcgaggagtgcccgcggctgtgcgtgtgtgaggtgcgcccctggttc
accccccaatccacctacagggaggcggccacggtggactgcaacgacctgcggctgaca
cacatcccctccaacctgtcctctgacacccaggtgctgctgctccagagcaactccatc
acccacaccagtggggagctagaggccctgttcaacctgacggagctggacctgtcccag
aacaacttcagcagcatggaggctgtgggcctggccaacatgaaccagctcaccaccctg
cacctggaggagaaccagattagccagctgcctgaccattgcctgcaggacctcagcaac
ctacaggagctctacatcaaccacaaccagatcagcactatcgcccccggggctttctct
ggcctacgcagcctgctgcgcctccacctcaactccaacaggctccgggtcatcgacaac
cgctggttcgaggcaacgcccaacctggagatcctgatgatcggagagaaccctgtcatt
ggcatcctggacatgaacttcaagcccctggggagcctgaggagcctggtcctggcctgc
atggacctcactgacattcctgggaatgctctggtgggcctggataacctggagagccta
tccttctacgacaacaagatggtccgagtgccccagctggccctgcagaaagtgcccaac
ctgaagttcctggacctgaacaagaacccagtgcacaagatccatgagggagacttcagg
aacatgctgcgtcttaaggagcttggcatcaacaacatggctgacctggtgtccatcgac
cgctacgccctggacaacctgcctgagctgaccaagctggaggccactaacaaccccaag
ctgtcctacgtgcaccggacagccttcagggacatgtcctccctggagagccttatgcta
aacaacaatgccctcaacgctgtctaccagcacaccgtggaggcgctgcccaacctgcgc
gagatcagcctgcacagcaacccactgcgctgcaactgtgtcatccagtggatgaggtcc
aacaggaccagcgttcgcttcatggagcccctggccatgctgtgtacctcgccgcccgag
ctccggggccagcgggtcagagaggtgaagctgcaggactccccagagcagtgcctgccc
ttcatctcccacgacaccttccccagccacctgagccttgagctgggcatgagtgtcagc
ctggactgcagggctatagctgagcctgacccagagatatactgggtgtctcctatgggg
agcaagatcacggtggacacgatgtcggagcggtaccatctgagcagtgagggcaccctg
cgactgtcccacgtccaagtggaggactcaggtcgctacacctgcgtagcccagaacaca
gagggcgccgacacacgcgtcaccaccatccgcgtcaatggcaccctattggacagcgct
gaggtgatgaagatctatgtcaagcagaccgagtcccactccatcctggtctcctggaag
atcaactccaacgtcatgacctccaacctcaagtgggcctcggccaccatgaagattgac
aacccccacatcacctacactgcacgtgtgcccgtcgacgtacacgagtacaacttgacc
cacctgcagccggccaccgagtacgaggtgtgcctcactgtgtccaacatccatctgcag
acccacaagtcgtgcgtcaacgtgaccacgcgcagcgtcaccttcaccctggacgtgctg
gaccagagacccagcgccgccctgctaaccgtcatggccaccatgctggccttcctcagc
ctggccactgtgggggtgtacgtgacccggcgctggaagaggaagaactaccaccactcc
ctgaagaagtacatgcagaagacctcctccatccccctcaatgagctctacccgcccctc
atcaacctatgggaggcagacagtgagaaggataaggagggcggtacagagagaaagccg
tccgccgtggacaccacacgcagctactacatgtggtga
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