Coregonus clupeaformis (lake whitefish): 121575200
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Entry
121575200 CDS
T08357
Name
(RefSeq) class E basic helix-loop-helix protein 40
KO
K03729
class B basic helix-loop-helix protein 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121575200
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
121575200
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GFIT
Motif
Pfam:
HLH
Hairy_orange
YabA
bHLH_NPAS4
DUF5365
Motif
Other DBs
NCBI-GeneID:
121575200
NCBI-ProteinID:
XP_041744086
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Position
10:14859093..14863157
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AA seq
425 aa
AA seq
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MEMERIPSAQPTPKHQQAELSDMQGMDFPMYVYKSRRGMKRGDDSKETYKLPHRLIEKKR
RDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALTTLLENQQQKILALQNG
MQIEQSSPSQENSEEIFRSGFHVCAKEVLQYLVNQESDGDLTPSHMIKHLHKVAAEVLQG
PSRSPCEPQPEETTSYHQHHQAHREKPAGQPPKPSEGHGKNCVPVIQRRYAHTGGEQSGS
DTDTDSGYGGEHVEHLASHAGYYGQERQLKRALGEKRPSFGIKQEDELCLKRSRVESSED
ESLSGGESSSSSSSVHGSYMSAYSPHQAQPHPLCMPFYLIPPSAAAYLPMLEKCWYSGAM
PMIYPGLGGSAQGMPSDRHAPSPSIMMSPRGRSPSPPTVAQSPMDSPAFLQALKQVLPMN
LETKD
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggaaaggattccaagtgcgcaacccacccccaagcaccagcaggctgagctg
tctgacatgcaagggatggatttccctatgtatgtatacaaatcccgtcggggaatgaaa
cgaggagatgatagcaaggaaacctacaaactgcctcatcgacttatcgagaagaaaagg
cgtgacaggataaacgagtgcatcgctcagttgaaagatttattgcccgagcacctgaaa
cttacaactcttggccatctggagaaggctgtggttttggagctcacgctcaagcatgtg
aaagctctaaccactctactggaaaaccagcagcagaaaatcctggctctgcagaatggc
atgcaaatcgagcagtcctctcccagccaggagaacagtgaagagatcttccgctcaggc
ttccatgtctgtgccaaggaggtgctgcagtacctggtcaaccaggagagtgacggagac
cttacaccctcccacatgatcaaacacctccacaaggtggccgctgaggtcctccagggt
ccttcccgtagcccctgcgaaccccagcccgaagagaccaccagctaccaccaacaccat
caggcccatagggagaagcctgcaggccagccccccaagcccagcgagggccacgggaag
aactgcgttcccgtcatccagcgaaggtatgcccatacgggcggcgagcagagcggcagc
gatacagacacagacagcggctatggtggcgagcatgttgagcatctggcgtcgcatgca
gggtactacggccaggagagacagctgaagagggcgctgggcgaaaagaggccgtcattt
ggcattaagcaggaagatgagctgtgcctcaaacgcagccgggtcgagtcatccgaggac
gagtctctctcaggcggagagtcatcctcatcctcctccagcgtccatggcagctacatg
agcgcctactcccctcatcaggcccaacctcatcccctctgcatgcccttctacctcatc
cccccctccgccgccgcctacctgcccatgctggagaagtgctggtactcaggggccatg
cccatgatctaccctggcctggggggctccgcacagggcatgcctagtgacaggcatgcc
ccctctccctcgatcatgatgtcccccagggggcgctctccctctccccccaccgtggcc
caaagccccatggactccccagccttcctccaagcgttaaagcaggtacttcccatgaac
ctggaaaccaaagactga
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