Coregonus clupeaformis (lake whitefish): 121575221
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Entry
121575221 CDS
T08357
Symbol
fancd2
Name
(RefSeq) Fanconi anemia group D2 protein isoform X2
KO
K10891
fanconi anemia group D2 protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
121575221 (fancd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cclu03400
]
121575221 (fancd2)
DNA repair and recombination proteins [BR:
cclu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
121575221 (fancd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FancD2
FANCI_S2
CCDC53
Motif
Other DBs
NCBI-GeneID:
121575221
NCBI-ProteinID:
XP_041744118
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All DBs
Position
10:complement(16353782..16377753)
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AA seq
1458 aa
AA seq
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MMRKKRRPSVDKSESAAPPDVSKSKKSRTTGRQSKTMAQEGTHIDSVFGQFLHEAGVILS
QGSTSNEIAVDQVVFQKRLQQRLKKSPRYPGIVQEFITGLESHIEDPERFRNCLLPCVPR
LADGYSSSVSSFQESLLRMLLGIEMLQTLVINTLFEKLPEFMFDGAGEDGLNIPRVIVNQ
LKWLDRVIDSKELAGKLMQLVSVAPVEIQRDIITSLPEILEDSQHSDIARELNSLLQENT
QLTVPILDAFSSLNLSSTLLAEVRVAVMATLSAVQLEDLPVVVKFILHSISSSDALEVVC
DLRKKLELELCVFPLVLQASQSRMKNKGTTESSNTSASSSSQDSVALVLDGIKSAVRFQK
TISEAWLKAIENVDTAEDHKVIDLLVLFILHSTNANHSRRGAERVLKVKVRAGQIQEALL
QKTFRGYAQVMRGYFPSILALAQSLLRSPDPCVVPIGGHMYKLSFTAFDSYCQQEVVGSL
VTHVCSGVGGEVDVALELLCGLVTEKPSEMALYAVFVKGILDYMDNLTPQQIRRLFHLLS
SLAFGQQQQGTHIQDDMHIVVRKQLSSTVPKYKRIGIIGAVMVVGSMGACRPKVEDSQGG
TLPKETYRQVTALLELVRSCSDSSPEAAALYYDELANLVLTCTLDPLVQAWIGKSVLEDF
QEDFVVDLGPDITGSFPFPACMMYNLDDEESQGGIAINLLRLLSDDLQHKGELWSQTGKS
KTQRRVSSLCLSPFFRLLRLCEEQQHQGDLEEIDALLGCPLILTDMDVVEKSESLSKPER
EFLCGLLFHTINWFREVVNAFCSQKDPEMKMKVVTRLQNITYLQTLLERTLAATPGYAPP
LANFDGESPDGAPLPSSSAAPKKGKKEGTGKKRKATAKNSSADTSQLEEGTEAEETQQDH
AEKEKVQEASRPGVSLVSYRPFFRELDMEVLSVLQCGLLSRSLLDSELHSKVREEVQLGP
AELVFLLEDMWRKLEFSLTAAPAKRAPFFKGKTDKSVGFSHLQQKSPKDIAACCVQLLPT
LCTHLENCHNHFQTLLSENQGVVDAPGLDVKEHQLLSSAYQLLLQVLHTTFSWSGFSQPE
HRGLLKRTLGVLADRLKEGGPELTMDQLIKHSFEYLLNFRSTVPSLSIALCLSQLLSTVA
ERGGHQATYREQTVTLARRFLCQEWVTTSGDREKGPKHNETLQALLSIYLEHTDDVLKAV
EEIAGEGIPELLNAAKDASSRTWPTLNRLTFLVFYKGMMGELEKAVRKIPPGRNSDSAEV
KSEKLLTWNLAVRDFHILVNLVKVFDNRPVLNVCLKYGRLFLESFLKLGMPLLDFSFKKH
KEDVQSLLKTFQLSTRQLHHMCGHSKIRQDTTLTNHVPALKKSLEQFVYRVKAMLTLNHC
QEAFWLGNLKNRDLKGEEILSQRSQGSDEEEEEEEEEGSPLPQEQSEDEAQESDSDGRKN
GNRKEEGDDDEITDDLDD
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgaaagaagagacgcccctctgtggacaaaagcgaaagtgctgcaccaccagat
gtgtcaaagtccaagaagagtaggaccactggccgtcagtccaagaccatggctcaggag
ggcacccatattgactctgtctttggccaatttctgcacgaggctggtgttatcttgagt
cagggcagtacatccaatgagattgctgtggaccaagtggttttccaaaagagactgcag
caacgactgaaaaagagtcccagataccccggtattgtgcaggagttcatcacaggactg
gagtctcacattgaggatcctgagaggttcaggaactgtctcctcccctgtgtaccacgc
ctggccgatgggtactcaagctctgtcagctcatttcaggagagtctgctgcgcatgctg
ctggggatcgagatgctgcagactttggtaatcaacactttgtttgagaagcttcccgag
ttcatgtttgatggtgctggagaggatggcctcaatatccctcgtgttattgtcaaccag
ctcaagtggttagacagagtcatagacagcaaggagttagcaggtaagctgatgcagctg
gtttccgtggcgccggttgagatacagcgtgacatcatcaccagtctgccagagatcctg
gaggactcccagcacagtgacattgccagggagctaaactccttactccaggaaaacact
cagctgactgtgccaatcctggatgccttctcaagcttgaatctgagctccactctgttg
gctgaggtgcgtgtggctgtcatggccaccctatctgctgtccagctggaggacctgcct
gtggtggtgaagttcattctgcactccatctcttcctcagacgccctagaggtggtgtgt
gaccttcggaagaagctggagctggagctgtgtgttttccctctggtgctgcaggcttct
cagagccgcatgaagaacaaggggacaaccgagtcctccaacacctcagcatccagcagc
agccaggacagtgttgccttggtgttggatggcattaagtctgcagtgcgcttccagaag
accatctctgaggcctggcttaaggccatagagaatgtagacactgcagaggatcacaag
gtcattgacctgctggtgctgttcatcctgcactccaccaatgccaaccacagccggcgt
ggggctgagagggtgctgaaggtcaaagtgagagcaggacagatccaggaggctttgcta
cagaaaaccttcaggggctacgcacaggtgatgcgaggttactttccctccatcttggcc
ctggcccagagtctgctgcgttcccctgacccttgtgtggtgcccatcggtggacacatg
tacaaactctcattcactgcctttgactcctactgccagcaggaggtggtgggctccctg
gtgacccatgtctgcagtggagtgggtggcgaggtggacgtggctctggagctgctgtgt
ggcctggtgacagagaaaccctctgagatggccctctacgccgtcttcgtcaagggtatc
ctggactacatggacaacctgactccccagcagatccgcaggctcttccacctgctcagt
agcctggccttcggacagcagcagcaaggcacccacatccaggatgacatgcacatagtg
gtccgtaagcagctctccagcaccgtgcccaagtacaagcgcatcggcatcatcggtgct
gtcatggtggtgggcagcatgggggcctgcaggcccaaagttgaggattctcaaggtggc
acattgcccaaggagacatacagacaggtgacggctctgctggagctggtgcggtcgtgc
agtgacagctctcctgaagctgctgctctctactatgatgaactagccaacctggtgctc
acctgcactctggaccctctggtgcaggcctggatagggaagagtgtgctggaggacttc
caggaagactttgtggtggatcttggaccagatataactgggtccttccccttccccgct
tgtatgatgtacaacctggacgatgaggagagtcagggaggcatcgccatcaacctgctg
cgactactgtctgatgacctccaacacaagggggagctgtggagccagactgggaaaagc
aagacacagaggcgagtgtcttctctgtgcctgtctccgttcttccggctgctcaggctg
tgtgaggagcagcagcatcagggagacctggaggagatagatgccctactgggctgccct
ctgatcctaactgacatggatgtggtggagaagtccgagagcctgtccaagcctgagaga
gagttcctctgtggcctgctcttccacaccatcaactggtttagagaggttgtgaatgca
ttctgcagtcagaaagatcctgagatgaagatgaaggtggtaactcgtcttcagaacatc
acctacctccagactctgttggagcggactttggcagcaacccctggctatgctcctcct
ctagccaactttgatggggagagtccagacggagctccactgcctagctcctctgctgct
ccaaagaagggaaagaaagagggtactggtaagaagaggaaagccactgctaagaactcg
tcagcagacacctctcagctggaggagggcacggaggcagaggagacccagcaggaccat
gcagagaaggagaaggttcaggaggccagcagacctggggtcagtctggtttcctaccgg
cccttcttcagggagctggacatggaggtgctcagtgtgctacagtgtggcctgctctcc
cgctctctgctggacagtgagctccacagcaaggtgcgtgaggaggtgcagctgggccca
gcagagttagtcttcctgctggaggatatgtggcgcaaactggagttcagtctgacagct
gcccctgccaagagagccccattcttcaagggaaagacagacaagagcgtgggtttctcc
cacttgcagcagaagagccctaaggacatcgctgcctgctgtgtccagctgctgcccact
ctctgcacccacctggagaactgccacaatcacttccagactcttctgtctgagaaccag
ggggtggtggacgccccaggcctggatgtgaaggagcaccagctgctgtcctcagcctac
cagctcctcctacaggttctacacaccaccttcagctggtctggtttctcccagccagag
caccgtggcctgctgaagaggactctgggagtgttggctgaccgcctgaaagagggaggg
cctgaactgaccatggaccagctcatcaaacacagctttgagtacctgctgaacttccgc
agcacggttcccagcctcagcatagctctgtgtctctcccagctgctcagcactgtggct
gagagaggagggcaccaggctacatacagggagcagactgtaaccctagcccggcggttc
ctgtgccaggagtgggtgactaccagcggagacagagagaaaggacccaaacacaacgag
actctccaagctctcctcagtatttacctggagcacactgatgatgttctgaaggcggtg
gaggagatagctggagagggcatccctgagctcctcaacgcagccaaagacgccagctct
agaacatggcccactctcaacaggctgacgttcctggtcttctataaggggatgatggga
gagctggagaaggctgtaaggaagattccccctggcagaaacagcgacagtgctgaggtg
aagagtgagaagctgctgacgtggaacctggctgtcagagacttccacatcctggtcaac
ctggttaaggtgtttgacaacagaccagtgctcaatgtgtgcctgaagtatggccgtctt
ttcctggagtctttcctgaagctggggatgccattgttggatttcagttttaaaaaacac
aaggaggatgtccagagcctgctgaagaccttccagctcagcaccaggcagctccaccac
atgtgtggacactccaagatccgccaggacaccaccttgaccaaccacgtgccagccctg
aagaagagcctggagcagtttgtgtacagagtgaaggccatgctcaccctcaaccactgt
caggaggccttctggctgggtaacctcaagaacagagacctcaagggtgaggagatcctc
tctcagcgctcacaggggagtgatgaagaggaggaggaggaggaggaggaaggctccccg
ctgcctcaggagcagtcagaggatgaggcccaggaaagcgactccgatgggaggaagaat
ggcaaccggaaggaagagggggacgatgatgaaatcacagatgacttggatgattag
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integrated database retrieval system
