Coregonus clupeaformis (lake whitefish): 121575238
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Entry
121575238 CDS
T08357
Name
(RefSeq) ruvB-like 1
KO
K04499
RuvB-like protein 1 [EC:
5.6.2.4
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03082
ATP-dependent chromatin remodeling
cclu04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121575238
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121575238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121575238
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cclu03037
]
121575238
Enzymes [BR:
cclu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
121575238
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
121575238
Chromatin remodeling factors
SRCAP complex
121575238
INO80 complex
121575238
INO80 complex (yeast)
121575238
SWR1 complex
121575238
ASTRA complex
121575238
Cilium and associated proteins [BR:
cclu03037
]
Motile cilia and associated proteins
Dynein assembly factors
121575238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP49
TIP49_C
RuvB_N
AAA
AAA_22
AAA_16
AAA_5
AAA_19
Mg_chelatase
AAA_18
AAA_28
Sigma54_activat
IstB_IS21
AAA_25
DnaB_C
bpMoxR
PhoH
nSTAND3
Parvo_NS1
Zeta_toxin
AAA_7
ATPase
ResIII
TsaE
AAA_11
RNA_helicase
MamS_MamX
SLFN-g3_helicase
NPHP3_N
AAA_33
DEAD
Motif
Other DBs
NCBI-GeneID:
121575238
NCBI-ProteinID:
XP_041744141
LinkDB
All DBs
Position
10:17622309..17629946
Genome browser
AA seq
456 aa
AA seq
DB search
MKIEEVKSTTKTQRVASHSHVKGLGLDEAGNAKQNASGLVGQETAREACGIIVELIRSKK
MSGRAVLLAGPPGTGKTALALAMAQELGNKVPFCPMVGSEVYSSEIKKTEVLMENFRRAI
GLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTGKGTKQLKLDPSIYESL
QKERVEAGDVIYIESNSGAVKRQGRCDTFATEFDLEAEEYVPLPKGDVHKKKEIIQDVTL
HDLDIANARPQGGQDILSMMGQLMKPKKTEITDKLRAEINKVVNRYIDQGVAELVPGVLF
VDEVHMLDIECFTYLHRALESTIAPIVVFASNRGNCLIRGTEDISSPHGIPLDLLDRVMI
IRTMLYTPQEMKQIIKIRAQTEGINISEEALSHLGEIGTKTTLRYAAQLLTPASLLGRVQ
GKEGVEREQVEEINELFYDAKSSAKILQDQQHKFMK
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgaggaagtgaaaagcaccacgaaaacccagcgtgtcgcgtctcacagccat
gtgaaaggactcgggctagacgaggccgggaatgcaaagcaaaatgcgtcaggtcttgtg
gggcaggagaccgcaagagaggcttgtggtattattgtggaactgatccgctcaaagaag
atgtcaggaagggcagttttactggctggacctcccggtacaggaaagactgccctggct
ttggctatggcacaggagctgggcaacaaggtgccattctgccccatggtgggtagtgag
gtctactcttctgagataaagaaaacagaggtgctgatggagaacttcaggagggccata
gggttgcgtattaaggagaccaaggaggtgtatgagggggaggttacagagctgaccccc
tgtgagacggagaaccccatgggtggttacgggaagaccatcagccacgtcatcattgga
ctgaagacaggcaagggcaccaagcagctcaagctggatcccagtatttatgagagcctg
cagaaggagcgtgtggaggcgggagatgtcatctacattgaatcaaacagtggagccgtc
aagagacaaggtcggtgtgacacatttgccacagagtttgacctggaggctgaggagtac
gtgccgctgcccaagggggacgtccacaagaagaaagagatcatccaagacgtcacgcta
cacgacctggatattgccaacgctagaccacagggaggtcaagatatcctgtctatgatg
ggacaactgatgaagcccaagaagaccgagatcacagacaagctgcgagctgagatcaac
aaggtggtaaaccgttacattgaccagggtgtggctgagctggtccccggggtgctgttt
gtggacgaggtgcacatgctggacattgagtgtttcacctatctgcaccgagccctggag
agcaccatcgcacccatcgtagtgtttgcttccaacaggggcaactgcctcatcaggggg
acagaggacatcagctctccccatggcattcctctggacctgctggacagagtcatgatc
atccgcaccatgctctacacaccacaggagatgaagcagatcataaaaatccgtgctcag
actgaggggatcaacatcagtgaggaggccctcagtcacctgggagagatcggaaccaag
accaccctcaggtatgcggcgcagctgctgaccccagccagtctgttaggcagagtccag
gggaaggagggagtagagcgggagcaggtggaggagatcaatgagctcttctatgatgcc
aagtcttccgctaagatcctccaggaccagcagcacaagttcatgaaataa
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