Coregonus clupeaformis (lake whitefish): 121575261
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Entry
121575261 CDS
T08357
Symbol
c1galt1b
Name
(RefSeq) glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-B
KO
K00731
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase [EC:
2.4.1.122
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00512
Mucin type O-glycan biosynthesis
cclu00514
Other types of O-glycan biosynthesis
cclu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
121575261 (c1galt1b)
00514 Other types of O-glycan biosynthesis
121575261 (c1galt1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cclu01003
]
121575261 (c1galt1b)
Enzymes [BR:
cclu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.122 N-acetylgalactosaminide beta-1,3-galactosyltransferase
121575261 (c1galt1b)
Glycosyltransferases [BR:
cclu01003
]
Glycan extension
Type 3 chain
121575261 (c1galt1b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
121575261
NCBI-ProteinID:
XP_041744166
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Position
10:18388838..18398470
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AA seq
405 aa
AA seq
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MKALGSRCAFFIGFLVGTCTLYVFLHQVWFERTFSTLQPDGLEKTAAQLHELEEDSKNWK
KERSALFNLNHPHHKGEDSHMADELYKKVRILCWVMTGPNNLQKKARHVKNTWSRHCNVV
VFMSSVDDPDFPTVGLGTKEGRDQLYWKTIRAFHYALENHGDEADWFLKADDDTYVVVDN
LRWVLANHTPEEPIYFGRRFKPYTKQGYMSGGAGYVLSKEALKRFVEGFKTKVCTHTTHV
EDLAMGQCMEKVGVVAGDARDTVLRETFHPFVPEQHLTSKFSKSFWYWSYCYYPISEGPN
CCSDLSVSFHYVDASLMYLLEYYTYHLRAFGYRYRYQPPSPLGYKIEAWDGADGGHSYSK
EQPAIQRGPLARVEGPSRTDRKQEMMPLAAAEEKDPPAAAQDDKQ
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgctgggctcgcgctgcgccttcttcatagggttcctggtggggacctgtacg
ctctatgtgttcctacatcaggtgtggttcgagaggaccttctcaacacttcagcccgat
ggcttggagaagacagcggctcagctacatgagctggaggaggacagcaagaactggaag
aaggagaggtcggccctcttcaacctcaaccacccacaccacaaaggtgaggacagccac
atggcagatgagctgtacaagaaggtgcgcatcctttgctgggtgatgaccgggcccaac
aacctgcagaagaaggcccgccacgtaaagaacacctggagccgccactgtaacgtggtg
gtgttcatgagctctgtggacgacccagacttccccactgtggggctgggcaccaaggaa
ggccgcgaccagctctactggaagaccatccgggccttccactacgccctggagaaccat
ggagacgaggccgactggttccttaaggccgacgacgacacctacgttgtcgtggacaac
ctgcgctgggtgctggccaaccacacgccagaggagcccatctactttggacgcaggttt
aagccctacaccaagcagggctacatgagcggcggggcaggctacgtgctgagcaaagag
gcccttaagaggttcgtggagggctttaagaccaaggtgtgcacccacaccacccacgtg
gaggacctggccatgggccagtgcatggagaaggtgggggtggtggccggggacgccaga
gacaccgtcctcagggagaccttccatccctttgtccctgagcagcacctcacctccaag
ttctccaagagcttctggtactggagctactgctactaccccatctcagaggggccaaat
tgctgctcggacctgtctgtgtctttccactatgtggacgcgtccctcatgtacctgttg
gagtactacacctaccacctgcgtgcctttggctacaggtaccgctaccagcccccaagc
cccctgggctataagattgaggcttgggatggggcagacgggggacactcgtactccaaa
gagcaaccggccatccagagggggccactggcgagggtggagggtccgtccaggacagac
aggaaacaggaaatgatgcctcttgctgcagcggaggagaaagacccgcctgctgctgcg
caggatgacaagcagtag
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