KEGG   Coregonus clupeaformis (lake whitefish): 121575272
Entry
121575272         CDS       T08357                                 
Name
(RefSeq) methylosome protein 50-like
  KO
K13221  methylosome protein 50
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cclu03041]
    121575272
   03036 Chromosome and associated proteins [BR:cclu03036]
    121575272
Spliceosome [BR:cclu03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    121575272
Chromosome and associated proteins [BR:cclu03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    CHTOP-methylosome complex
     121575272
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_RIG_2nd WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_EML EIF3I Beta-prop_EIPR1 Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd WD40_RFWD3 Beta-prop_CAF1B_HIR1 Beta-prop_WDR19_1st Beta-prop_WDR75_1st WD40_Gbeta Beta-prop_DCAF4 Beta-prop_SPT8 WD40_MABP1-WDR62_2nd Beta-prop_Aladin Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_RIG_1st Beta-prop_SCAP NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_DCAF12 WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_NWD2_C MIOS_WD40
Other DBs
NCBI-GeneID: 121575272
NCBI-ProteinID: XP_041744180
LinkDB
Position
10:18864847..18870003
AA seq 338 aa
MKSTVNTNMIKENRWNIPPNAPACMEKHLDSAQYRADGTLLLGASSLTGRCWLGSIWVYS
DPKQSPNEGFCKAGVQTEAGVTEAKWVSERGVLVASDSGAVELWELAEDESLLVNRFTKL
EHDHIVTSVSPAGSNHAVSGSMDCRIKVWDLSQGEVVSTYNAHSKPVTCVSCNPSDDSLF
LSCGQDGRLLLWDRRKPTKPASRLEVEPSCCPTSVAWHPHHRTTIAYGDELGRVTLKDFQ
GTEPAQTQSTHSRRVSSLAFSTHSAPLLASISDDCSVAVMNSELKETLRDRRHQDFVRGV
CWAPGGSDTLTTVGWDHQVLHHITGQDGPATGDSTSPP
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgaaaagtacagtaaataccaatatgatcaaggaaaacagatggaacatacccccaaat
gccccggcgtgcatggagaagcatttggactcggcgcagtacagggcagatggcaccctg
ttgctgggagcctccagtctgacgggcagatgctggctgggctccatctgggtctacagt
gaccccaagcagtctcccaacgagggcttctgcaaggctggtgtgcagacagaggctggg
gtcacagaggcaaagtgggtttcagagaggggcgtcctagttgcatctgactcgggtgct
gttgagctgtgggagctagcggaggacgagagtctgctggtgaatcggttcactaaactc
gagcatgatcacatcgtcaccagcgtgagccctgctgggtcaaaccacgccgtcagcggc
agtatggactgccgaatcaaagtctgggaccttagtcagggggaggtggtcagcacatat
aacgctcactctaagccagtcacttgtgtatcctgcaatccatccgatgactccctcttc
ctctcatgtggccaggatggccgtctgttgctttgggacaggaggaaacccaccaaacca
gcctctagattagaggtagagcccagctgttgccctacctcagtggcctggcatccccac
cacaggaccacaatcgcctacggtgacgagctaggacgcgtgactctgaaagactttcag
ggcacagagcctgcccagacgcagagcacccacagccgtagggtctccagcctagccttc
tccacacacagcgcccccttgctagcctccatcagtgatgactgctccgttgctgtgatg
aactcggagcttaaggaaacgttgagagacaggaggcaccaggactttgttcggggtgtc
tgctgggcccctggcggttctgacacacttaccacagtgggctgggaccaccaggtcctc
caccatatcacgggacaggacggccccgccactggagactccacgtccccaccgtag

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