Coregonus clupeaformis (lake whitefish): 121575275
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Entry
121575275 CDS
T08357
Name
(RefSeq) interferon regulatory factor 6-like
KO
K10154
interferon regulatory factor 6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121575275
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121575275
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
121575275
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121575275
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
121575275
NCBI-ProteinID:
XP_041744186
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All DBs
Position
10:18909833..18915165
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AA seq
490 aa
AA seq
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MAVTPRRVRLKPWLVAQVDSGLYPGLVWIDRDNKRFRIPWKHATRHTPQHEEENTIFKAW
AVETGKFQEGIDDPDPAKWKAQLRCALNKSREFNLVYDGTKEVPMNPLKIYDVCDIPQPL
SNPGSSDSGSWTPNDGDEDEPGTPEPLPPYPTSNGTSPALMWSPPGSVSPLHPPSCPPSC
PPSVEEWPKEEVKPWPKEEPLDVEMQPSPLEMAPPPPLDMPSPPMPDMMFASPEMWISSL
PMTDLEVQFQYRGKEVCPAMTVSNPQGCRLFYGDLGPMVNQEELFGPISLEQLRFPSTEH
IANDKQRVFTNRLLDVMDRGLILEVSGHDIYAVRLCQCKVYWSGPCAPNPNAPNLIERQR
KIKLFCLESFLSGVIAHQRGQSASPPQFDINLCFGEEWPDSRPRERKLIMVQIIPVVARM
ITEMFSGDCMRSFDSGSVRLQISIPDIKDNIVTHLKQLYRLLQTHQGQEGWPQALSPGAG
MSLPQALHAQ
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgaccccgcggcgtgttcggctcaagccctggctagtggcccaggtggacagt
gggctctacccaggcctggtgtggatcgatcgtgacaacaagcgtttcaggatcccctgg
aaacacgctacgcgccacaccccccagcacgaggaagagaacaccatctttaaggcctgg
gcggtggagacaggaaagttccaggagggtattgatgaccctgaccctgccaagtggaaa
gcccagctccgctgtgccctcaacaagagcagagagttcaaccttgtctacgatggtacc
aaagaagtccccatgaaccccctgaagatctatgacgtctgtgacatcccacagcccctc
agtaacccaggatcctcagattctgggtcctggacgccgaatgacggtgatgaagatgaa
ccaggtactccagagcccctccctccttatccaacatccaacggcaccagccccgctcta
atgtggtctcctcctgggtcagtatcgcccctccacccccccagctgcccacctagctgc
cccccatcagttgaagagtggcccaaagaggaggttaagccatggcccaaagaggagcct
ttggatgtggagatgcagccttcccctctggagatggcgccccctcctccacttgacatg
ccttcccctcccatgcctgacatgatgttcgcctccccagagatgtggatcagctccttg
cccatgacagacctggaggtgcagttccagtatcggggtaaggaggtgtgtccagccatg
acagtcagtaatccccagggctgcaggctgttttacggggacctgggccccatggtcaac
caggaggagctgtttggccctatcagcctggagcagctgaggttcccctctaccgagcac
atcgccaacgacaagcagagggtcttcaccaaccgcctactggacgtcatggaccgaggc
ctcatcctggaggtcagcggccatgacatctatgccgtccgcctctgccagtgcaaggtg
tactggtcaggcccctgtgcacccaaccccaatgcacccaacctcatagagaggcagagg
aagatcaagctgttctgtctggagtcctttctcagcggtgtaatagcccatcagaggggc
cagtcagccagccctcctcagttcgacatcaacctgtgctttggagaggagtggcctgac
agcagacccagggagaggaagctcatcatggtgcagatcatccctgtggtagcacgtatg
atcactgagatgttctcaggcgactgcatgcgctccttcgacagtggcagtgtgcgcctg
cagatctccatcccggacatcaaggataacatcgtgacccacctgaagcagctgtaccgc
ctgttgcagacccaccagggccaggagggctggcctcaggctctgtccccgggggctggc
atgagcctgccgcaggccctgcacgcccagtga
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