Coregonus clupeaformis (lake whitefish): 121575296
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Entry
121575296 CDS
T08357
Name
(RefSeq) chitin synthase chs-2-like isoform X1
KO
K00698
chitin synthase [EC:
2.4.1.16
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00520
Amino sugar and nucleotide sugar metabolism
cclu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
121575296
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cclu01003
]
121575296
Enzymes [BR:
cclu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.16 chitin synthase
121575296
Glycosyltransferases [BR:
cclu01003
]
Polysaccharide
Structural polysaccharide
121575296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chitin_synth_2
Glyco_trans_2_3
Glyco_tranf_2_3
Motif
Other DBs
NCBI-GeneID:
121575296
NCBI-ProteinID:
XP_041744224
LinkDB
All DBs
Position
1:complement(83446466..83460435)
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AA seq
1437 aa
AA seq
DB search
MEELKFRGRKREGRHRDTWDPFQLNPIGAEKEEKRRCFELFQHLVAGLVGIMVLSSAVIS
KGSLLVLATLSSPTSTRTPKERQYYVLMLVCSLVVPNLLVFLKSLWKCAFKNFVPPNMRT
MGIVCVIECLVSLGTSILVLVVMPQFDVLTNLFISGGVCMLSSVLQIAFRLQRENWKIIF
PICSLMLVLTGYFLLGADYYVRVTSYVSGQEKDCYWYVGIAVFASFLVSLTWWENPVQAS
NNMQEMLTELDTFRDFVFVISSLLRIVVIVAVYLIYHVLIQENIVWSDFDFTPKADEDEN
TIARHRETLDIGLTVLFLQAFFSAACHWFGVVACKIHSVRMSFAFPVCFTGPAVLILGMI
LFLTQSEDLAPADTTSIIDFCSSLVDLSTKNTTAVVMLEITKSICRTSLSSHYWTWPFSL
LALEGICMWLGLITCTYYVWNFRVQRIERTTELFVRRLYESAFIDLSMLLNTKMKVVRTR
NQESSVVDDVENCVIYLCATMWHETYDEMLKILTSMFRLDRYRGDPKEEHKDVFDFECHI
FVDDAFMIVKEKGKKLINEYVTDLIHVVIEVYRVFTNKEPDDVSIIETPYGGRLMFVMPE
GNMLYVHLKDKQLIRNKKRWSQIMYLYYLLGWKGYIVKNPQKITRQNNPCRASLISLDGE
SFLLPQHDNDSKRKHISDDNTYIMALDGDTDFQPAALILLVDRLRKYGNVGAACGRIHPT
GMGPMVWYQKFEYAVGHWLQKTAEHVFGSVLCSPGCFSLFRGSALMDDNVLKRYTTTATR
ASEYVQYDQGEDRWLCTLLLQQGWRVEYNAASDAYTNSPQEFKEFYNQRRRWGPSTLANT
LDLLHSGNETVKRNSSISRLYIFYQIFTVSSSILGPASVSLMIAGAFQFVFDIEGTLSII
IAVIPPIFYMFICFLAKPNAQIIIAAIMSVLYAFLMLASFFAIIGDMAMQGTFITPTGLF
LVSMAVMYLVTAILHPQEFSMIIYGLMYFICIPSGYLLLTIYSLVNMHIVTWGTRETNKE
KEEKMTQNVLCDRNCKLCCWDMKLQVTQETDNLMLQQLQQAVNPNTQVTEQVVKEQQANT
KKEINNALNEENNKEILPESSDSKWAKKDSDSKSDTSSDDSLDSLPKKESAYSSIEDDNR
DDDDNMLYDGSLYSGFTEEEREILPQSDWVQPVKEEFLKKLTYANMKRNLQEQIRYTLRN
KNQEDVCEELVMMLTDTVNGELKDKVGPEDVLSDSQLEELQYALNEAARRILKTNRMERL
ERRVKRAIEKTLIAPQVVKLTEDEHDFWKKLLERYLAPIVDDKAHKEEVTRELKSLRNKA
VFLYFIVNVLWIVATFFLQAIGNDVISIKIEKIWPNGTSSGEYLKVEPLSLMFLLSFAVL
LVVQFLAMLYHRVYTLIHVVSYRSTEKDYIPRSEEDEEGLILENQIANGLVITSDDL
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctcaaattcagagggcggaaaagggaagggaggcacagggacacctgggat
ccattccagttgaatcccattggtgctgagaaagaggagaagagaagatgctttgagctg
ttccagcacctggtggcagggttagtggggataatggtcctgtccagtgctgtcatcagc
aagggctctctgctagttctagccacgctctcaagccccacatcaactaggactcccaag
gaaagacaatactacgtgctcatgctggtgtgctctttggtggtgcccaacctgctcgtg
ttcctcaagtcactgtggaaatgcgctttcaagaacttcgttccgccaaacatgagaact
atgggaattgtgtgtgtcattgaatgcctggtgtctcttgggacctccatcctggtgctg
gttgtgatgccccagtttgacgtactcacaaacctgttcatctctgggggagtctgcatg
ctttcctctgtcctacagatagcatttcgcctgcagagagagaactggaagatcatcttc
cccatttgttcgcttatgcttgtcctgaccggctactttctcctcggggcagactattac
gttcgggtaacctcgtatgtatcaggccaggaaaaggactgttattggtatgttggcatt
gcagtttttgcatcctttttggtttctctgacctggtgggaaaacccagtgcaggcaagc
aacaacatgcaagaaatgctgactgagttggacaccttcagagactttgtgtttgtgata
tccagcctcttaaggatagtagtcattgttgctgtgtacctcatctaccacgtgttgata
caggaaaacattgtatggtcagattttgatttcactcctaaggccgatgaagatgaaaat
acaattgcaagacatagagagacccttgatattggtcttactgtccttttcctccaagcc
tttttctctgctgcatgccattggtttggggtggtggcttgtaagatccactccgtgcga
atgagcttcgccttccctgtctgtttcactgggcccgccgttctcatcctcggcatgatc
cttttcctaacgcaatctgaagacctagctccggccgacacaacttctatcatagacttt
tgctcaagcctagtggacctaagcaccaagaacactaccgcagtcgtgatgctggagatc
accaagagcatctgcaggacttctttgagcagccattactggacctggcctttctcccta
cttgcgctggaggggatttgcatgtggctcgggcttatcacatgcacctactacgtgtgg
aacttcagggtccagaggatcgagcgcacaactgagctgtttgtgcgacgcctctacgag
tctgccttcatcgacctgtctatgcttctgaacactaagatgaaggttgtacgaacgagg
aaccaagagagtagtgttgttgacgacgtggagaattgtgtcatttacctctgtgcaaca
atgtggcatgagacctatgatgagatgttgaagatcctgacatccatgttcaggttggac
cggtacagaggtgacccaaaagaggaacataaagatgtttttgactttgagtgccacata
tttgtagatgacgcattcatgatagtaaaggagaagggcaaaaagttgatcaacgaatat
gtgaccgatctcattcacgtggtcatagaggtatacagggtattcaccaataaggagcct
gatgatgtgtcaattatcgagactccctatggtgggcgattaatgtttgtgatgccagag
ggaaacatgttgtatgtccatctgaaagacaaacagctgatccgaaacaagaagagatgg
tcacagatcatgtacctgtattatctgcttgggtggaaaggatacattgtcaagaatcct
cagaagataacgagacagaacaatccttgccgtgccagtctcatatcattggatggggag
agtttcctgttgccacagcatgacaatgacagtaagagaaaacacatatctgatgacaat
acctacatcatggccttggatggggacacagacttccagcccgcagctctgatcttactg
gtggatcgacttcggaagtacggcaatgtgggtgctgcatgcggaagaatccatccaaca
ggaatgggtccaatggtgtggtatcagaaatttgagtacgctgttggtcactggctccag
aaaacagctgagcacgtgtttggttcagtcctctgcagtcctggatgcttcagcttgttc
aggggatcagctctgatggatgacaatgtgctcaagagatacaccaccactgcaactaga
gcctctgagtacgttcaatatgatcaaggtgaggaccgctggctgtgcaccctgctcctc
cagcagggctggagagtggagtacaacgctgcgtcggatgcctacaccaactcccctcag
gagttcaaagagttctataaccagaggcgtcgctgggggccctccactctagccaacacc
ctggacctcctgcacagcggcaatgagacggtcaagaggaactcttccatctccaggctc
tacatcttctaccagatattcactgtcagctcctccattctcggccctgcctccgtttct
ctgatgatagcaggtgctttccagtttgtgttcgacattgaaggaaccctgtccatcatc
atagcagtcatcccacctattttctacatgttcatttgctttttggcaaaaccaaatgcc
cagataatcattgcagccattatgagtgtgttgtacgcctttctgatgttagcgtcattc
ttcgccatcatcggtgacatggctatgcagggcacatttatcaccccaactggcctcttc
ctggtgtccatggctgtcatgtacttggtaactgccatccttcatccccaggagttcagc
atgatcatctatggtctgatgtacttcatctgtatccccagtggttatctcttgctcaca
atctactccctggtgaacatgcacattgtcacatggggcacccgagagacaaacaaggag
aaagaagagaagatgacccagaatgttctctgtgatcgcaactgcaaactttgctgttgg
gatatgaaactacaagtcacccaagagactgataacttgatgctccagcaactccagcag
gcagtcaatccaaacacgcaagtcactgaacaggtggtgaaagaacaacaagccaacact
aagaaagagataaataatgcactgaatgaagaaaacaacaaggaaatacttccagagtct
tcagacagcaaatgggccaagaaagacagcgactcaaaatctgatacaagcagtgatgac
agtcttgacagccttccaaaaaaggagagtgcttattccagcattgaagatgacaacaga
gatgatgatgataatatgctttatgatggttcgctttatagtggcttcaccgaggaagaa
agagaaatactacctcaaagtgattgggttcagcctgtcaaggaagagttcctgaagaaa
ttgacctacgccaacatgaaaaggaaccttcaggaacagatccgctacaccctgaggaac
aagaaccaggaggatgtgtgtgaagagctggtgatgatgctaacggacacagtgaacgga
gagctgaaggacaaggtgggcccagaggacgtgctgagcgacagccagttagaagagctg
cagtacgcccttaacgaggccgccaggaggatcctaaaaaccaaccgcatggagaggctg
gagaggagggtgaaaagagccatagagaagaccctcattgccccacaggtggtgaaactg
actgaggatgaacatgacttttggaagaaactgcttgagagataccttgcacccattgtt
gatgataaagcacataaagaggaagtgacaagggaactgaagtcactacggaacaaggca
gtgtttctgtatttcatcgtcaacgttttgtggattgtggccactttctttttacaagcc
attggaaatgatgtgattagcatcaagattgaaaaaatctggccaaatggcacatcatct
ggagaatacctgaaggtggagcctctcagtctgatgttcctcttgtcatttgctgtgctt
ctagtggtgcagttcctggctatgctttaccacagagtatatactcttatccatgtggtg
tcgtacagaagcacagaaaaagactacattcccagaagcgaggaggacgaggaggggctg
attcttgagaaccagatcgccaatggccttgtgatcaccagtgatgacttgtga
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integrated database retrieval system
