Coregonus clupeaformis (lake whitefish): 121575298
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Entry
121575298 CDS
T08357
Name
(RefSeq) cadherin EGF LAG seven-pass G-type receptor 2-like isoform X1
KO
K04601
cadherin EGF LAG seven-pass G-type receptor 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121575298
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cclu04030
]
121575298
04515 Cell adhesion molecules [BR:
cclu04515
]
121575298
Peptidases and inhibitors [BR:
cclu01002
]
Mixed peptidases
Family P2
121575298
G protein-coupled receptors [BR:
cclu04030
]
Adhesion receptor family
Cadherin EGF LAG (CELSR)
121575298
Cell adhesion molecules [BR:
cclu04515
]
Cadherins
Major cadherins
121575298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
GAIN
7tm_2
Cadherin_CELSR2_9th
Laminin_G_2
Laminin_G_1
EGF
GPS
Fibulin_C
HRM
EGF_TEN
EGF_laminin
Cadherin_4
hEGF
Dicty_CAR
Motif
Other DBs
NCBI-GeneID:
121575298
NCBI-ProteinID:
XP_045078803
LinkDB
All DBs
Position
10:complement(19586172..19662398)
Genome browser
AA seq
3045 aa
AA seq
DB search
MPVIKWDLLFIIFGWFELISLSDCYSVHISEDAEQGTVIASVEQSGACTLDQVIAPKFSK
TFIETDAFARIVFLSGSLNCASLSSNPFTLYTVVDCMNNVPGSRHLLTSQYDVYVHGRNC
SSKHKRKSQWDLEIISLFKAHNHQIECHESGTALLRVWDLLPGSPTHSSTHCKVIRSSEF
YFSEGQLVVSNTLCLKHDTLLELDLHCNQYIGDNREAKVNSISVHWRVGQGSFKQGHLGK
LLQQAAQSESGIVSRSKRAVNSSPQFQPPMYQVAVAENKPAGTPVVVLKAVDADEGEAGR
LEYFIEALFDSRSNNLFAVDPVNGAVSTVEVLDREQKDTHVFRVTAVDHGTPRRTAMATL
TITVSDTNDHDPVFEQQDYKESVRENLEIGYEVLTVRATDGDAPVNGNILYHVLNSNGSN
DVFEIDSRSGVIRTKGPVDRETVEAYMLLVEANDQGRDPAPRSATATVHIIVEDDNDNGP
QFSEKRYVVQVPEDMAPNTEILQVIATDQDKGSNAMVHFSIMSGNTRGQFYIDAQTGKMD
LVSQLDYEANKEYTIRIRAQDGGRPPLSNISGLVTVQVLDVNDNAPIFVSTPFQATVLEN
VPVGYSIIHIQAVDADSGDNSRLEYRLIETTPNFPFSINNSTGWIVVAADLDRESVDFYN
FGVEARDHGHPVMSSSASVSMTILDVNDNNPEFTQRSYYMRLNEDAVVGTSVVTVSAVDQ
DINSVVTYQISSGNTRNRFSITSQSGGGLITLALPLDYKLERQYVLSVTASDGTLFDTAK
VFVNVTDANTHRPVFQSSHYTVNINEDRPVGTTVVVISATDEDTGENARITYFMDDSIPQ
FDIDSDTGAVTTQMGLDYEDQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNSPRFLR
DHYLGSVMEDVPVFTSVVQVSATDRDSGLNGRVFYTFQGGEDGDGDFIIESTSGIVRTLR
RLDRENMPFYNLQAFAVDKGVPALKTSVDIQVTILDVNDNPPVFEKDEFDIFVEENSPIG
LVVAHVLASDPDEGSNAQIMYQIVEGNIPEVFQLDIFSGELTALTDLDYETRLEYVIVVQ
ATSAPLVSRAIVHIKLVDKNDNVPVLKNFQIIFNNYVTDKSSSFPTGVIGRIPAHDPDAS
DQLQYSFEAGNELNLVILNQSTGEIRLSQALDNNRPLEASMRISVSDGIHSVSAHCLLQV
TIITDEMLSNSITLRLANTSQEHFLSLLLAQFLEGVARVLSADREDVVVFNIQDDTDVSA
RILNVSLSVAVPSPSEGLRVGGGGPRVGDSVGRGAAGASGGTEFFGSEELQERLYLNRSL
LARISSQQVLPFDDNICLREPCENYMKCVSVLKFDSLAPFVASDTILFRPIHPIAGLRCR
CPTGFTGDYCETEIDLCYSKPCGTHGLCLNREGGYTCECLDDYTGKRCELSSRSGRCGPA
VCKNGGTCVNLLVGGFKCECPSGGYEKPYCEMTTRNFPLQSFLTFKGLRQRFHFTLSLSF
ATKEPNGLLLYNGRFNEKHDFIAVEIISEQIQLTFSAGETKTTVSPYILGGVSDGQWHVV
QVHYYNKPILNQAGMPQGPSDQKVVVVTVDNCDTSVALRFGHVIGNYTCSAQGSQSGSKK
SLDLTGPLLLGGVPKLPEDFPIQNRQFVGCMKDLKIDNRHIDMASFIANNGTLPDVFNFP
GCSAKRHFCINNPCLNGGTCVNLWGSFSCDCPLGFGGRNCEKVMANPQRFLGNSLLQWTN
LVAVVTVPWHVELMFRTRQPSATLLHLTAGQHHNLTLQLRGGSVVMGLQRGEDSTLSQVE
EVTVNDGDWHHLQLELKDVPGGAPRHKAVLSFDHGLYTASMEVDTKLKGAKVKTLSVGGI
TGADGKIQHGFRGCMQGLRMGETSSSVSLSLSQARRVNMEQGCSVPDPCVSNPCPSNSYC
SDDWDSHSCTCLTGYYGDNCTDVCALNPCEHQSACTRKAGSFRGYTCDCPSNHFGQYCEK
KTDLPCPRGWWGHKTCGPCNCQTDKGFDANCNKTSGECRCKDNHYRPEGSEACLLCECYP
VGSFSRACERESGQCQCKPGVIGRQCDHCDNPFAEVSPNGCEVIYDSCPQAIEAGIWWPR
TKFGLPAAVPCPKGSIGTAIRHCDEHKGWLPPNLFNCTSVTFTKLKALSEKLARNVSLLD
SGRVQQMAAMLANATLHTVEYYGSDVKVAYRLTQSLLQYESNQQGFSLTATQDVHFTENL
VRVGSAILSPGTQPHWELIQQTEGGTAALLHQYEEYANTLAQNMRKTYLSPFTIVTPHIV
ISIDRLQKMNFAGAKLPRYQSLRGLRPQDQETAVTLPDSVFEPPMETKGHRQLDTFPESS
VRNHTSNRKRRHRGPDDPEQEAIASVIIFHSLASLLPASYDPDKRSLRVPKRPVINTPVV
SITVHDNEELLQHTLDKPITVQFRMVTTEERSKPICVFWNHSILAGNGGWSAKGCEVVFR
NNTHISCQCYHMTSFAVLMDISRRENGEILPVKLVTWSTVGVTLGFLFLTTLFLLCLRAM
HCNKTSIINNGATALFISELIFILGINLADNQFVCTVIAILLHFFYLCTFSWLFLEGLHV
YRMLSEIRDINYGPMRFYYMVGWGVPAFITGLAVGLDPEGYGNPDFCWLSMYDTLIWSLA
GPIAMVVSMNIFLYILASRASCSIRHHSFEKKEPPISGLRTSCGVLLLVTVTCLLAILSV
NSDMIIFHYLFAGFNCLQGPFIFFFRIVFNKEARNAMRYCCSRKRPDHMIKSKPSSYNCN
TSYMDGRLYHLPFGDSSVSLNDTLQSGKSQQSYVPFVLRDDGGLNNSQVHIALNEHGSLF
HETKEHLDDHDSDSDSDLSLEDDQSGSYASTHSSDSEEEGPYPPGECWESMASNVSKRPH
PQDNNLSKLYWPGEYVSTASDSEGLGGAGRLKVESLANPELGQTRDHRGMPDDRPGDKAE
GYGKDNVMLLPSLPNLNAHPQKGILKKKQLSPIAERNGINRIHNELSENAPGHASSQGSS
SSESRGGGAKPSLPDQLNGVAMSIKAGTVDGDSSGSEFLFFNFIH
NT seq
9138 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcattaagtgggatttgttgtttattattttcggctggtttgaactcatttca
ctgtcggattgctacagtgtacacatcagtgaggatgcggagcaggggacggtgatcgca
agtgttgaacagagcggggcatgcactttggatcaggtaatcgctcctaaattctcaaag
acctttattgaaactgatgcgtttgcgcgcattgtgttcctttcgggtagtttaaattgt
gcctcgctcagctccaaccctttcaccttgtacactgttgtggactgcatgaacaatgtc
ccagggtcgaggcacctcctcacaagccagtatgatgtgtatgttcacggcaggaactgt
tctagtaaacacaaaaggaaatctcaatgggacttggagatcatcagtttgtttaaagcc
cataatcatcagatagaatgccacgagtctggtactgcgctcctccgggtatgggatcta
ctacccggctctccgacccacagcagtacgcactgcaaggtgattaggagttcggagttc
tacttttcggagggccaattggttgtgtccaatacactgtgtttgaaacacgacacactt
cttgagctagacttacattgtaaccaatacataggagataatagggaagctaaagtgaac
agcatctcagtccactggcgggtgggtcaaggctccttcaaacagggccacttggggaag
ttactacagcaggctgcccagtctgagtcaggcatagtgagcaggagcaagagggctgtc
aacagtagcccccagtttcagcctcctatgtaccaggtggctgtggcagagaataagcca
gctggaactcctgtagttgttttgaaggcagtagatgctgatgagggggaggcaggcagg
ctggagtacttcatagaggccctgtttgacagccgctccaacaacctatttgctgtggac
ccagtcaatggtgcagtctccactgtggaggtcctggatagagagcagaaggacacccat
gtattccgtgtgaccgctgttgaccacggcactccccgccgtacggccatggccaccctc
accatcacagtgagcgacactaatgaccatgatcccgtctttgagcaacaggactacaag
gagagtgttagggagaacctagagattggctacgaggtgctgaccgtcagggccacagac
ggagacgccccggtcaacggtaacatcctgtaccacgtcctcaacagcaacggttcgaac
gatgtttttgagattgactccaggtcgggggtgatccgcaccaagggcccagtggataga
gagacggtggaggcctacatgctgttggtagaggccaacgaccagggtcgtgaccccgcc
ccccgcagcgccacggcaacagttcacattattgtagaggacgacaatgataatggtccc
cagttcagtgaaaagcgatatgtggtgcaggttccggaggatatggcacccaacacagag
atcctgcaagtgattgccacagaccaggacaaagggagtaacgccatggttcacttcagc
atcatgagtggcaacaccaggggccagttttacattgacgcccagacaggcaagatggac
ctggtcagtcagttggactacgaggctaacaaggaatacactattcgcatccgcgctcag
gacgggggacgcccgccgctctccaacatcagtggcctggtaacggtgcaggtgctggat
gtcaatgataacgcccccatttttgtcagcacccccttccaggccacagtgctagagaac
gtgccggtgggttattccatcattcacatccaggctgttgacgcagactccggcgacaat
tccaggctggagtaccgcctcattgaaaccacacccaacttcccattctccatcaacaac
agcactggttggatagtcgtagccgctgatctggacagggagagcgtggacttctacaac
tttggggtggaggcccgtgatcatggccacccagtgatgtcctcctcagctagcgttagc
atgaccatcctcgacgtcaacgacaacaacccagagttcacacagaggtcatactacatg
cgcctcaatgaggacgccgtcgtggggacgagcgtggtgacggtttctgcagtggaccag
gatatcaacagtgtggtgacgtatcagatctccagtgggaacaccaggaacaggttctcc
atcaccagccagagtggagggggcctcatcaccctggccctgccccttgactacaagctg
gagcgccaatacgtcctgagtgtcaccgcgtctgacggcacactcttcgacactgccaag
gtgttcgtcaacgtcaccgacgccaacactcaccgacccgtgtttcagagctcccattac
acagtcaacatcaatgaggacagacctgttggcacaaccgttgtggtgatcagtgctaca
gatgaggacactggggagaatgcacgtataacttacttcatggatgacagcatcccccag
ttcgacattgactcagacacaggtgctgtcaccacccagatggggctggactatgaagat
caggtgtcctacacgttagccatcacggcccgggacaacggcatcccacagaagtctgac
actacttacctggagatcctggtgaatgatgtgaatgacaactctcctcgattcctcaga
gaccactacctaggctctgtgatggaggacgtaccagtgtttaccagcgtagtccaggtc
tctgccactgaccgagactctggcctcaatggacgtgtcttctacactttccaaggggga
gaggatggcgatggtgacttcataattgagtccacctctggtattgtgcgaacgctgcgt
cgcctggaccgagagaacatgccattctacaacctgcaggcctttgctgtggataaaggt
gttcctgctctcaagacatccgtggacatccaagtgaccatcctggatgtgaacgacaac
cctcctgtgtttgagaaggatgagtttgacatatttgtggaggagaacagccccataggc
ctggtagtggcccacgtattagcctcagacccagacgaggggagcaacgcccagatcatg
taccagatagtagagggaaacatcccagaggtgttccagctggacatcttctcaggagaa
ctgactgctctgacagatctcgactacgaaacgcggttggagtatgtcatcgtggtccag
gccacctccgccccactggtcagccgtgccattgtgcacatcaagctggtcgacaagaat
gacaacgtaccagtgctgaaaaacttccagataatcttcaataattatgtcactgacaag
tccagtagcttccccacaggggtgattgggcggatccctgcccatgacccagacgcctca
gaccagctccagtacagctttgaggctggtaatgagctgaacctggtcatcctgaaccag
agcacgggggagatccggctgagccaggcactagacaacaacagacccctggaggcctcc
atgaggatatctgtctcagatgggatccactcggtgtcggcccattgtctgctccaggtc
accatcatcacagacgagatgctctccaatagcatcacgctgcgattggccaacacctcc
caggagcacttcctgtccctgctattggcccagttcctggagggcgtggcccgtgtgctg
tcagctgaccgcgaggacgtggtggttttcaacatccaggacgacacggacgttagcgcc
cgcatcctcaacgtcagcctgtctgtggccgtgccctctcccagtgagggcctgcgggtg
ggaggagggggaccccgggtgggtgacagcgtgggcagaggggcagcaggggccagtgga
gggacagagttctttggctctgaggagctacaagagaggctgtacctgaaccgcagcctg
ctggcccgcatctcctcccagcaggtgctgcccttcgatgacaacatctgcctgcgagag
ccctgcgagaactacatgaagtgtgtgtctgtgttgaagttcgacagcctggcacccttc
gtggcgtctgacacaatcctgttccggcccatccaccccatcgccgggctgcgctgccgc
tgccccacgggcttcacaggagactactgcgagacagagatcgacctgtgctactccaaa
ccctgtggaacccatggcctgtgtctcaacagagagggaggctacacctgcgagtgcctc
gatgactataccggcaagcggtgtgagctgtcatcccgctccgggcgctgcggcccagct
gtgtgtaagaatgggggcacctgtgtgaacctgctggtgggagggttcaaatgtgagtgc
ccgtctggcggttatgaaaagccctactgtgagatgaccaccaggaacttccccctgcag
tcgttcctcaccttcaagggactccgccagcgcttccacttcaccctctccctctcattt
gccacaaaggagccaaatggtttattactctacaatggccgcttcaacgagaagcatgac
ttcatcgctgtggaaatcatcagtgagcagatccagctcaccttctctgcaggtgagacc
aagacgactgtgtcgccctacatccttggaggtgtcagtgatggccagtggcatgtggtc
caagttcactactacaacaagccaatcctaaaccaggccggcatgccccagggtccctct
gaccagaaggtcgtcgtagtaaccgtggacaactgtgacacctcagtggcactgcgattt
ggtcatgtaattgggaactacacctgctctgcccagggcagccaatcaggatccaaaaaa
tctctggatctgactggtcctctcctcctggggggcgtgcccaaactgcctgaggacttc
cccatccagaaccgccagtttgtgggctgcatgaaggacctgaagatcgacaaccgccac
atcgacatggctagcttcatcgctaacaacggcacgctaccagatgtctttaacttccca
ggatgctctgctaaaaggcacttctgcatcaacaacccatgtctgaacggagggacctgc
gtcaacctgtggggctccttcagctgtgactgccccctaggatttggaggccggaactgc
gagaaggtgatggccaacccgcagcgtttcctgggtaacagcctattgcagtggactaac
ctggtggcagtggtcactgtgccgtggcacgtggagctcatgttccgcacgcgccagcct
agtgccaccctgctgcacctcaccgccggacagcaccacaacctcaccctacagctgcgc
ggtggcagtgtggtgatgggcctgcagaggggcgaggactccaccctgtctcaggtagag
gaggtgaccgtgaatgacggggactggcaccatctgcagctggagctgaaagatgtcccg
gggggcgcgccccgccacaaggctgtgctctcctttgatcatggcctctatacggccagc
atggaggtggatactaagctgaaaggggcgaaggtcaagactctgagtgtcgggggcatc
actggggctgatgggaaaatacagcatggcttccgcggctgtatgcagggtctgcgtatg
ggggagacctccagctcggtgtctctcagcctgtctcaggccaggagggtgaacatggag
cagggctgcagcgtaccagacccctgtgtctctaacccctgcccctccaacagctactgc
agcgatgactgggacagccactcctgcacctgcctcaccggttactatggcgataactgc
acagacgtatgtgcgctaaacccctgcgagcatcaatcagcttgcaccaggaaggctggc
tccttccgcggctacacctgtgactgtcccagcaaccactttggccagtattgcgagaag
aagactgacctgccttgtcccaggggttggtggggacataagacctgtggtccctgtaac
tgtcagacagataagggcttcgatgccaactgcaacaagaccagcggcgagtgccgctgt
aaggataaccactaccgtccagagggcagcgaggcgtgtctgttgtgtgagtgttaccca
gtgggctccttctcacgggcgtgtgagagggagagcgggcagtgccagtgtaagccaggg
gtcatcgggcgccagtgtgaccactgtgacaaccccttcgctgaggtgtcgcccaacggc
tgcgaagtgatctatgacagttgtccccaggcaatagaggcagggatctggtggcccagg
actaagtttggtctccctgcagcagtcccctgtcccaagggatctatcggcactgctatt
cgccactgtgacgaacacaagggatggctgccccccaacctcttcaactgtacctctgtc
accttcaccaaactcaaggccctgtcggaaaagcttgcccgtaacgtgtctctcctggac
tctgggcgggtccagcagatggcagccatgttggccaacgccacgctgcacacggtggag
tactatggcagtgatgtgaaggtggcctaccgcctcacccagagcctactgcagtacgag
agcaaccagcagggcttcagcctgaccgccacccaggacgtccacttcactgagaacctg
gtgcgggtgggcagtgccatcctgtccccgggcacacagccacactgggagctgatccag
cagactgaggggggcacggcggccctgctgcaccagtatgaggagtacgccaacaccctg
gcacagaacatgaggaagacctacctcagccccttcaccattgtcaccccacacatagtc
atctcaatagatcgtctccagaagatgaactttgccggagccaagctccctcgctaccag
tctctgagagggctgaggcctcaggatcaggagacggccgtcaccctccccgactccgtc
ttcgagccgcccatggagaccaagggccaccgccaactggacaccttcccagaatcctct
gtgagaaaccacacgtccaacaggaagaggcgacatcgaggtcctgacgaccctgagcag
gaggccatcgctagtgtgatcatcttccacagcctggcctcgctgctgcctgcgagctac
gaccctgataagaggagtctgagagtgcccaagcgtccagtcatcaacaccccggtggtc
agcatcacggtccatgacaacgaggaactgctgcagcacaccctggacaaaccaatcact
gtgcagttccgcatggtcaccaccgaggagcgctccaaacccatctgtgtcttctggaac
cactccatactagcggggaacggaggctggtcagccaaaggctgtgaggtggtgttcagg
aacaacactcacatcagctgccagtgttaccacatgaccagctttgctgttctcatggac
atctctaggagagagaacggtgagatcctgccggtgaagctggtgacgtggagcacggtg
ggcgtgaccctgggcttcctcttcctcaccactctcttcctcctctgcctgcgggccatg
cactgcaacaagaccagcatcatcaacaacggagccaccgccctcttcatctccgaactc
atcttcatcctgggcattaacctggcagacaaccagtttgtgtgcacagtcatcgctatc
ctgctgcatttcttctacctgtgcaccttctcctggctcttcctggagggcctgcacgtc
taccgcatgctgagcgaaatacgagacatcaactacggacccatgcgcttctactacatg
gtcggctggggcgtccctgccttcatcacaggcctggcggttggactggacccagagggt
tatgggaacccagacttctgctggctgtccatgtacgacactcttatctggagcttggca
gggcccatcgccatggtggtgtctatgaacatcttcctgtacatcctggcctccagagca
tcctgctcaataagacaccacagctttgagaagaaagagccccctatctccgggctgagg
acgtcatgtggggttctcctcctggtcactgtaacatgtctgttagctatactctcagtc
aacagtgacatgatcatcttccactacttgtttgctggattcaactgtcttcagggtccc
ttcatcttcttcttccgcattgtcttcaacaaggaggcgaggaacgccatgcgctactgc
tgcagccgcaaacgcccggatcacatgatcaagtccaagccctcgtcatataactgtaac
accagctacatggatggcagactgtaccacctgccgtttggagactctagtgtgtctctg
aacgacaccctgcagagcggcaagagccagcagagctatgtcccctttgtcctcagggat
gatggtggcctgaataacagccaggtacacatcgctctgaacgagcacggctcactcttc
catgaaactaaagagcatttagatgatcacgactcagactcggacagtgacctgtctctg
gaggatgaccagagcggatcttacgcctccacacactcctctgacagcgaggaggagggg
ccctatccaccaggggaatgctgggaaagcatggcatccaatgtgtccaagagaccacac
cctcaggataacaacctgagtaagctgtactggccaggggagtatgtgtcgacggctagc
gacagtgagggcctggggggagcaggtaggctgaaggtagagtctctggccaaccctgaa
ctgggccagacccgggaccaccgaggcatgccagacgacaggccaggggacaaggcagag
ggctatgggaaggacaacgtgatgctgctgcccagtctgcccaacctcaacgcacaccca
cagaaaggaatcctgaagaagaagcagctctcccccattgcagagagaaatggtatcaac
cgcatccataacgagctgtcggagaatgctccgggccatgcctcctcccagggctcctct
tccagtgagagccgagggggcggggccaagcccagcctaccagatcagctgaatggtgtc
gccatgagcatcaaggcggggacagtggacggtgactcatcagggtcagaattcctattc
tttaattttattcactga
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integrated database retrieval system
