KEGG   Coregonus clupeaformis (lake whitefish): 121575312
Entry
121575312         CDS       T08357                                 
Symbol
cldn19
Name
(RefSeq) claudin-19 isoform X1
  KO
K06087  claudin
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03272  Virion - Hepatitis viruses
cclu04382  Cornified envelope formation
cclu04514  Cell adhesion molecule (CAM) interaction
cclu04530  Tight junction
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    121575312 (cldn19)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    121575312 (cldn19)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    121575312 (cldn19)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    121575312 (cldn19)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:cclu03037]
    121575312 (cldn19)
   04147 Exosome [BR:cclu04147]
    121575312 (cldn19)
Cilium and associated proteins [BR:cclu03037]
 Other cilia and associated proteins
  Stereociliary proteins
   121575312 (cldn19)
Exosome [BR:cclu04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   121575312 (cldn19)
  Exosomal proteins of colorectal cancer cells
   121575312 (cldn19)
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 TMEM127 PROL5-SMR Comm DUF4234 8xMP
Other DBs
NCBI-GeneID: 121575312
NCBI-ProteinID: XP_041744241
LinkDB
Position
10:20014987..20028665
AA seq 222 aa
MANSGFQLLGYFLALGGWIGIISTTALPQWKQSSYAGDAIITAVGLYEGLWMSCASQSTG
QVQCKVFDSMLSLDVHIQTCRALMVVSVLLGFIGMIVSVVGMKCTKVGDNNPTSKGLIAV
SGGALFLLAGLCTLVSVSWYATQVSYQFFNPNTPVNARYEFGSALFVGWAAASLTVLGGS
FLCCSCSSEERRGQQYYRQSQPSTAREQNVKHSPPEKKEEYL
NT seq 669 nt   +upstreamnt  +downstreamnt
atggcaaactcgggtttccagttactgggttacttcctggcgttgggaggttggataggc
atcatctccaccacggctctgccccagtggaagcagtcttcgtacgcgggcgacgccatc
atcacggccgtggggctctatgagggcctgtggatgagctgtgcctcccagagtacagga
caggtgcagtgcaaggtgtttgactccatgttgtcactggatgtgcacatccagacgtgt
cgtgctctcatggtggtgtccgtgctgttgggcttcataggaatgatagtgagtgtggtg
gggatgaagtgcactaaggtgggcgacaataaccccacctccaaggggctcatcgctgtg
tctggaggagccctctttctactcgcaggtctgtgtacgctggtgtccgtgtcctggtac
gccactcaggtgtcctatcagttcttcaacccaaacacgccagtcaatgccaggtatgag
tttgggtcagccctgtttgtgggatgggcagcggccagcttgacggttttgggtggatcc
ttcctgtgctgctcctgctccagtgaggagaggcgagggcagcagtactaccgccaatca
caaccatccacagccagggaacaaaatgttaaacattccccaccagagaaaaaggaggaa
tacttgtag

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